Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1202
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   5.4  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   7.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   9.5  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 298 RPSGRWCEATIRGIILNA 245
           R S RWCE T+  +I +A
Sbjct: 363 RESCRWCECTLGDLIADA 380


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = -2

Query: 349 YCSVREEPQFRTFGSCTRPSGR-----WCEATIRGII 254
           YC   ++ +F  F S T P G+     W + + R I+
Sbjct: 395 YCGEEKDKEFLRFISSTAPDGKAKYQEWVQDSCRNIV 431


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 193 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 86
           + R   GSK     S  + S+ E  RR+P    RSM
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,498
Number of Sequences: 2352
Number of extensions: 14029
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)