Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1199
(578 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 104 8e-24
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 41 2e-04
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 37 0.002
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 36 0.003
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 35 0.010
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 34 0.017
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 33 0.023
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 33 0.030
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 33 0.040
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 33 0.040
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 33 0.040
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 33 0.040
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 33 0.040
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 32 0.053
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 31 0.12
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 31 0.16
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 30 0.21
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 29 0.37
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 0.37
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 29 0.37
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.37
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 29 0.37
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 29 0.49
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 29 0.49
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 29 0.49
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 29 0.49
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 29 0.65
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 0.65
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 0.65
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 28 0.86
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 28 0.86
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 28 0.86
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 28 0.86
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 28 1.1
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 28 1.1
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 28 1.1
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 28 1.1
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 27 1.5
SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1 |Schizosaccharom... 27 1.5
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 2.0
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 2.6
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 26 3.5
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 26 3.5
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 26 3.5
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 26 3.5
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 26 3.5
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 25 6.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 6.1
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 25 6.1
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 25 6.1
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 25 8.0
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 25 8.0
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 25 8.0
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 104 bits (250), Expect = 8e-24
Identities = 45/91 (49%), Positives = 65/91 (71%)
Frame = +2
Query: 2 TDMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGGQD 181
TD+Q D T F+T+ KD TAK D +S E++K Y T+ P+N+++ +P+ D V+LGGGQ+
Sbjct: 195 TDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTYLTDTPLNTSSFTPVQDFVILGGGQE 254
Query: 182 AMEVTTTSTRQGKFDARFFHLVFEGSLAEWK 274
A +VTTT+ RQGKF+ARF+H + E L K
Sbjct: 255 ARDVTTTAARQGKFEARFYHAILEEELGRVK 285
Score = 83.0 bits (196), Expect = 3e-17
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 396
E GRV+GHFGPIN++A HP G YASGGEDGYVRVH FD++YFD+ +
Sbjct: 280 ELGRVKGHFGPINTIAVHPKGTGYASGGEDGYVRVHFFDKNYFDFKY 326
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNF 369
R +GH GP+ +AFHP + SGG+D V V N+
Sbjct: 48 RFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNY 82
Score = 28.7 bits (61), Expect = 0.65
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 396
E GHF ++ FHP + S ED +RV + ++ TF
Sbjct: 248 EVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTF 294
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
+EGH +N AFHP S G+D V++
Sbjct: 208 LEGHDRGVNWCAFHPTLPLILSAGDDRLVKL 238
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 23 DGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGGQDAMEVTTT 202
D +F ++S DHT K++D ++L+ + E + S A SPI H ++ + +
Sbjct: 115 DNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSSIRLC 174
Query: 203 STRQGKF 223
+ G +
Sbjct: 175 DMQSGSY 181
Score = 31.1 bits (67), Expect = 0.12
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
H+G +N LA+ D + AS G D +RV N +
Sbjct: 245 HYGTVNGLAWTSDARYLASCGTDDRIRVWNME 276
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDY 402
EGH + ++AFH DGK A+ EDG V+V + +D+
Sbjct: 80 EGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDH 123
Score = 35.5 bits (78), Expect = 0.006
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEY 106
D S D T VTAS DH A+L++ +S E +++Y
Sbjct: 264 DCAFSADSTYLVTASSDHVARLWELSSGETIRQY 297
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.010
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNTLVF 438
GH G ++++ PDG ASGG DG + + + ++S Y+ + N LVF
Sbjct: 190 GHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN---INALVF 241
Score = 25.8 bits (54), Expect = 4.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
GH + S++ PD + SG D +++ N
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 33.9 bits (74), Expect = 0.017
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNS 85
D+ + DGT F TAS DHT KL+ S
Sbjct: 482 DLAVGHDGTYFATASADHTVKLWSLKS 508
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 33.5 bits (73), Expect = 0.023
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALS 142
D+ ++RDG VTA D K++D + + L Y T P LS
Sbjct: 270 DLAVNRDGRYMVTAGADSLLKVWDLRTYKELHSYYTPTPAQRLTLS 315
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRV 360
H GP+ LA + DG+ + G D ++V
Sbjct: 264 HRGPVRDLAVNRDGRYMVTAGADSLLKV 291
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 33.1 bits (72), Expect = 0.030
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYT 393
+ G ++GH + LA+ DG ASGG D V++ + S +T
Sbjct: 296 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 341
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 32.7 bits (71), Expect = 0.040
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
+GH + S+ F PDG+ +ASG D R+ + D
Sbjct: 577 QGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 29.1 bits (62), Expect = 0.49
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
R+EGH + S+AF PD SG D ++V
Sbjct: 479 RLEGHKESVYSIAFSPDSSILLSGSLDKTIKV 510
Score = 28.7 bits (61), Expect = 0.65
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 396
+ ++AF PDGK +G ED +++ + Y F
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVF 398
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 32.7 bits (71), Expect = 0.040
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH I S+ HPDG A+GG DG +R+
Sbjct: 16 GHRLSIFSIHIHPDGSRIATGGLDGTIRI 44
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 378
H G + S+ F P+G+ ASG +D V + + +++
Sbjct: 73 HTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEA 106
Score = 27.9 bits (59), Expect = 1.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
R+E H + + F P GK +A+ +D ++V
Sbjct: 171 RIEAHQSHVKGITFDPAGKYFATESDDRTIKV 202
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 32.7 bits (71), Expect = 0.040
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDGYVRVHNF 369
IN+ AF D K +GGEDGY+R ++F
Sbjct: 121 INAFAFTSDLKWLFTGGEDGYIRKYDF 147
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.7 bits (71), Expect = 0.040
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH GP++SL+F+ G ASG D VR+
Sbjct: 465 GHEGPVSSLSFNSSGSLLASGSWDKTVRI 493
Score = 30.3 bits (65), Expect = 0.21
Identities = 10/42 (23%), Positives = 24/42 (57%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 396
+ H+ +++L + DG+ +G +DG ++V + + + TF
Sbjct: 336 QSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTF 377
Score = 28.7 bits (61), Expect = 0.65
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 232 FLPLSI*REFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
F P + RE+ GHF I S+++ D + + S +D R+H+ D
Sbjct: 133 FAPFVLHREY---TGHFDDIVSISWSADSRFFISTSKDLTARLHSVD 176
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 295 SLAFHPDGKSYASGGEDGYVRVHNFDQ 375
SLAFHPDGK DG + N +
Sbjct: 514 SLAFHPDGKEVCVASLDGQLTFWNVQE 540
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 32.7 bits (71), Expect = 0.040
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH G + L+ H G ASGG+DG +R+
Sbjct: 377 GHKGRVRCLSVHVSGNWLASGGDDGVLRI 405
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 32.3 bits (70), Expect = 0.053
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVN 127
D+ S+DG F++ S D T KL+DT + L + ++R N
Sbjct: 315 DLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTN 355
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
+GH PI L+F DG+S+ S D +++
Sbjct: 307 QGHARPIRDLSFSQDGRSFLSTSFDKTIKL 336
Score = 26.6 bits (56), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKS 324
++ H GP+ S+AFHP S
Sbjct: 523 KLPAHSGPVQSMAFHPQETS 542
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVR 357
H G INS+ F +GK + + +D +R
Sbjct: 395 HLGGINSITFLENGKRFVTTSDDSSMR 421
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 31.1 bits (67), Expect = 0.12
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
+ S+AF PDGK A+G ED +R+ + Q
Sbjct: 337 VRSVAFSPDGKYLATGVEDQQIRIWDIAQ 365
Score = 29.5 bits (63), Expect = 0.37
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
++ GH + S+AF PDGK SG D +++
Sbjct: 453 QLHGHEESVYSVAFSPDGKYLVSGSLDNTIKL 484
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
++GH + S+A P+G +A+G D R+ +++
Sbjct: 550 LQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 584
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 253 REFGRVEGHFGPINSLAFHPDGKSYASGGED 345
R + + GH I SL F DGK+ SG D
Sbjct: 367 RVYRLLTGHEQEIYSLDFSKDGKTLVSGSGD 397
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 30.7 bits (66), Expect = 0.16
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 11 QLSRDGTMFVTASKDHTAKLFDTNSLELL 97
+LS+D +F+T + D + K+FD S++L+
Sbjct: 97 ELSQDERLFITGADDKSLKVFDVESIDLV 125
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 30.3 bits (65), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
EGH I S+A PDG +SGG D R+
Sbjct: 304 EGHSEGIFSIACQPDGSLVSSGGNDAIGRI 333
Score = 28.3 bits (60), Expect = 0.86
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGED 345
R+EGH + +AFHP G S D
Sbjct: 260 RLEGHLARVGRVAFHPSGDYLVSASFD 286
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 29.5 bits (63), Expect = 0.37
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYV 354
+++GH + +LAF P+G + AS DG V
Sbjct: 462 QLQGHTNTVWALAFSPNGNTLASADNDGNV 491
Score = 28.7 bits (61), Expect = 0.65
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
+ GH G + S+A HP +A+ +D VR++N
Sbjct: 286 ISGHTGRLWSVAAHPMLPLFATSSQDKSVRIYN 318
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 29.5 bits (63), Expect = 0.37
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 253 REFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
R EGH I L F P G SG D V+V N
Sbjct: 180 RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 262 GRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
G + GH + + +F+P + ASG D +R+ N D
Sbjct: 501 GVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE 411
+EGH G I L + G S DG V+V + T D + +
Sbjct: 545 LEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHED 592
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 29.5 bits (63), Expect = 0.37
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNF 369
+F + + + PDGK A GG+D V +++F
Sbjct: 363 YFAGLTCVTWSPDGKFIAIGGKDDLVSIYSF 393
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.37
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVR 357
G+ INS++F P + +G EDG R
Sbjct: 188 GNTSDINSISFFPSNADFVTGAEDGIAR 215
Score = 25.0 bits (52), Expect = 8.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH I+SLA DG A+G D VR+
Sbjct: 272 GHENRISSLALTSDGTMLATGSWDECVRL 300
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.5 bits (63), Expect = 0.37
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 378
V+ H + +AF P+ + + +DG ++V NF S
Sbjct: 160 VQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMS 196
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 29.1 bits (62), Expect = 0.49
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 396
+ GH GP+NS+ D SG +D +++ + + + +TF
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTF 430
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 29.1 bits (62), Expect = 0.49
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 17 SRDGTMFVTASKDHTAKLFDTNSLELLKEY 106
S D + FVT+S ++ K++D N+ L++E+
Sbjct: 240 SPDSSQFVTSSAGYSCKIWDANTGSLIREW 269
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 29.1 bits (62), Expect = 0.49
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDGYVR 357
I SLA HPDG + +G E+G +R
Sbjct: 336 ITSLAVHPDGNLFVAGLENGELR 358
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 29.1 bits (62), Expect = 0.49
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDY 390
++GH + ++ F PD + S G D V +H ++ DY
Sbjct: 574 LKGHSLTVTTIKFSPDDRYILSAGRDRLVCLHEQAENLLDY 614
Score = 28.7 bits (61), Expect = 0.65
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
+ GH + +A+ P+GK Y S G D R+
Sbjct: 366 ISGHTKSVKGVAWDPEGKFYLSAGTDQTTRL 396
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.7 bits (61), Expect = 0.65
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEY 106
D+Q S G F TAS D TA+L+D L+ +
Sbjct: 450 DVQFSPFGYYFATASHDQTARLWDVEHAAPLRVF 483
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH ++ ++FHP+ A+G D R+
Sbjct: 485 GHQNDVDCVSFHPNAAYLATGSSDHTTRM 513
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 28.7 bits (61), Expect = 0.65
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
R+ H GP+ F PD K S ED R+ + D
Sbjct: 374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVD 409
Score = 28.7 bits (61), Expect = 0.65
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSY 381
+GH GP+ +AF P G +A+ D ++ + D Y
Sbjct: 418 KGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIY 454
Score = 28.3 bits (60), Expect = 0.86
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH P+ ++A PDG + AS +G + +
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHL 531
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 253 REFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVR 357
R + GH G I SL+F + SGG D VR
Sbjct: 538 RRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVR 572
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 28.7 bits (61), Expect = 0.65
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 262 GRVEGHFGPINSLAFHPDGKSYASGGED 345
G GH PI +A PDGK +G +D
Sbjct: 362 GEYTGHQEPILCMAITPDGKRVVTGSDD 389
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 28.3 bits (60), Expect = 0.86
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 286 PINSLAFHPDGKSYASGGEDGYV 354
P+N L FHP ++ A+ G DG V
Sbjct: 235 PVNDLKFHPIHQTLATAGGDGVV 257
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 0.86
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
R+ GH IN++ ++ D ASG D VR+
Sbjct: 93 RLGGHLAQINTIRYNEDSSILASGSFDSKVRL 124
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 0.86
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 253 REFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
R F + GH P+ S+AF P A+ G+ + +++
Sbjct: 178 RLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYD 215
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
+ G++ GH I ++AF+P G S +G +++ + D
Sbjct: 221 QVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIKIWDID 259
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 28.3 bits (60), Expect = 0.86
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH + ++ + PDG+ ASGG D VR+
Sbjct: 471 GHEDQVFAVDWSPDGQRVASGGADKAVRI 499
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
++ GH +N +F PDG+ A+ D VR+
Sbjct: 384 KMHGHQKVVNHASFSPDGRCIATASFDSSVRL 415
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 8 MQLSRDGTMFVTASKDHTAKLFDTNSLELLKEY 106
++ + DGT F + D+ +FD +SLE K Y
Sbjct: 295 LEWNYDGTQFASGGNDNLVCIFDIDSLENKKFY 327
Score = 25.4 bits (53), Expect = 6.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
H + L ++ DG +ASGG D V + + D
Sbjct: 288 HQEQVCGLEWNYDGTQFASGGNDNLVCIFDID 319
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRV-HNFDQSYF-DYTFDYNR 408
+EGH ++ FH SG EDG V++ H S Y F +R
Sbjct: 224 LEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDR 272
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 27.9 bits (59), Expect = 1.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDG 348
+NS+AFHP ++++ G DG
Sbjct: 257 VNSIAFHPQYGTFSTAGSDG 276
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 17 SRDGTMFVTASKDHTAKLFD 76
SRDGT + S D +AK+FD
Sbjct: 83 SRDGTKVASGSVDKSAKVFD 102
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 8 MQLSRDGTMFVTASKDHTAKLFDTNSLELLK 100
+ +S DGT+ TAS D A+++D S + LK
Sbjct: 186 VSISADGTLCATASYDGMARIWDVLSGQCLK 216
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
++GH ++S+ F+P G SG D VR+ N
Sbjct: 134 LKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
++ H I LA + + SGG DG+V+++N
Sbjct: 245 KLSNHQKSITCLAMNSENTRLLSGGLDGHVKIYN 278
>SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +2
Query: 80 NSLELLKEYKTERPVNSAALSPILDHVVLGGGQDAMEVTTTSTRQGKFDARFFHLVFEGS 259
+S + +++++PVNS L H+ D +T+ G R HLV++
Sbjct: 659 DSFHITMIHESQKPVNSRIWEQYLQHM-----HDK-----NTTKMGNISFRITHLVWDDR 708
Query: 260 LAEWKVTLVLSTVW 301
+ ++VT+ ++VW
Sbjct: 709 VICFRVTMNENSVW 722
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 2.0
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 2 TDMQLSRDGTMFVTASKDHTAKLFD 76
T + +S+DG+ ++ S D+T ++FD
Sbjct: 223 TSLAISKDGSSLLSNSMDNTVRIFD 247
Score = 26.2 bits (55), Expect = 3.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
++GH I SLA DG S S D VR+
Sbjct: 215 LKGHKDIITSLAISKDGSSLLSNSMDNTVRI 245
Score = 25.4 bits (53), Expect = 6.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
GH + F P G +ASGG D + + N
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWN 78
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
++GH I ++ F+ + SGG DG VR+ NF+
Sbjct: 425 LQGHEDLIRTVRFNDE--KIVSGGYDGTVRIWNFN 457
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 26.2 bits (55), Expect = 3.5
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 141 LRAAEFT-GLSVLYSLRSSNELVSNNLAV*SLEAVTNIVPSRES 13
L A E+ G S+RSS EL N V V + PSR+S
Sbjct: 15 LNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQS 58
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +2
Query: 8 MQLSRDGTMFVTASKDHTAKLFDTNSLELL 97
+ S+D ++ T+S D T+K+FD ++ + +
Sbjct: 186 VNFSKDDSLLATSSGDQTSKVFDLSTQQCI 215
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNTL 432
H + +L+ HPD ++ASG D ++ F + F F+ + I NTL
Sbjct: 330 HKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHN--AIVNTL 378
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDGYVRV 360
IN + P G + +GG DG V+V
Sbjct: 549 INMAQWQPKGNLFVTGGSDGIVKV 572
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSY 381
H P+N L++ +G+ SGG++G + + + S+
Sbjct: 261 HANPLNGLSWALNGEYLLSGGQEGVLVLWQMETSH 295
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGED 345
GH G +N+L + DG+ SG +D
Sbjct: 43 GHTGCVNTLDWSADGEFLLSGSDD 66
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 6.1
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 442 YETLEYCKLTT-PYCNRKCSQSKIDQSYEHAHNHLHLRKH 326
Y+ L+Y +L T + + K Q H H H H + H
Sbjct: 693 YKDLDYVELMTGKKVYSRTERKKDTQKQSHDHGHSHSKSH 732
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYF 384
GH G L F DG+ S ED +R+ + + S F
Sbjct: 192 GHEGACFDLKFSSDGRYLCSVSEDRTLRLWSIESSPF 228
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 25.4 bits (53), Expect = 6.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 367 SYEHAHNHLHLRK 329
+YEH +HLH+RK
Sbjct: 239 TYEHVKSHLHIRK 251
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 25.0 bits (52), Expect = 8.0
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKTE---RPVNSAALSPILDHVVLGG 172
+++ S + V ++D + F+ E + EY TE P ++ A+ +LDH ++ G
Sbjct: 146 EIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIEG 204
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 295 SLAFHPDGKSYASGGEDGYV 354
S+ HP GK Y GG+ G++
Sbjct: 510 SVLSHPHGKVYLCGGKKGFL 529
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +1
Query: 253 REFGRVEGHFGPINSLAFHPDGKSYASGGEDGYV 354
++ ++E H + LAF+ DG A+ ++G +
Sbjct: 179 KQITKIEAHKDSLACLAFNSDGTMLATASDNGRI 212
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,329,586
Number of Sequences: 5004
Number of extensions: 46353
Number of successful extensions: 278
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -