Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1199
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 109 1e-24
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 36 0.016
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 36 0.016
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 36 0.021
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 36 0.021
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 35 0.036
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 35 0.048
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 34 0.063
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 34 0.063
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 33 0.11
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 33 0.15
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 33 0.15
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 33 0.19
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.26
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 32 0.26
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 32 0.34
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.45
Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical pr... 31 0.59
U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.59
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 31 0.78
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 30 1.0
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 30 1.0
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 2.4
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 29 3.2
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 29 3.2
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 29 3.2
AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical ... 29 3.2
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 28 5.5
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 28 5.5
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 28 5.5
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 28 5.5
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 28 5.5
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 28 5.5
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 28 5.5
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 27 7.3
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 27 7.3
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 27 7.3
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 27 9.6
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC006708-8|AAF60429.3| 481|Caenorhabditis elegans Hypothetical ... 27 9.6
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 109 bits (262), Expect = 1e-24
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGGQDA 184
D+QLS G ++AS+D TA L D N L+ LK+YK+ERPVNSA +SP DH+ LGGG+DA
Sbjct: 195 DLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSERPVNSACISPNRDHICLGGGEDA 254
Query: 185 MEVTTTSTRQGKFDARFFHLVFEGSLAEWK 274
M+VT TS G F+A+ +H+VFE A +K
Sbjct: 255 MQVTQTSVSAGHFEAKIYHMVFEEEFARFK 284
Score = 74.9 bits (176), Expect = 4e-14
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDY 402
EF R +GHFGPIN++A+HP G A+GGEDGY+R+ FD+ Y +T+D+
Sbjct: 279 EFARFKGHFGPINTMAWHPSGTIIATGGEDGYIRIQEFDEDYLGFTYDF 327
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYN 405
GH G +N++ PDG ASGG+DG + + ++ YT N
Sbjct: 196 GHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 36.3 bits (80), Expect = 0.016
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYT 393
+ + H GP+ + FH D + SGG+D ++V N+ Q +T
Sbjct: 48 KFDEHDGPVRGICFHHDQPIFVSGGDDYKIKVWNYKQKRCIFT 90
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE 411
E GH+ ++S+ FHP+ S ED +RV + + + F + E
Sbjct: 243 ELDSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENE 294
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 378
+EGH +N +AFH SG +D V++ ++++
Sbjct: 203 LEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNET 239
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.021
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
EGH IN++ FHP+G ++A+G +D R+
Sbjct: 239 EGHEADINTVRFHPNGDAFATGSDDATCRL 268
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.021
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
EGH IN++ FHP+G ++A+G +D R+
Sbjct: 239 EGHEADINTVRFHPNGDAFATGSDDATCRL 268
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFD 399
+ H I + + PDG A+G EDG V++ N S+ TFD
Sbjct: 357 QAHSLRITTAEYSPDGSLMATGAEDGKVKIWNSRSSFCTVTFD 399
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.036
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
EGH + +AFHPDG +GG D Y RV
Sbjct: 335 EGHSKSVADVAFHPDGSVALTGGHDCYGRV 364
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.048
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
+ GH P++S+ F+ DG ASG DG VR+
Sbjct: 228 IPGHEDPVSSVCFNRDGAYLASGSYDGIVRI 258
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNF--DQSYFDYTFD 399
GH IN++AF P G ++A+G +D R+ + DQ Y+ D
Sbjct: 224 GHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHD 267
Score = 30.7 bits (66), Expect = 0.78
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 163 TWWWSRC-YGSDNHI-NQTG*IRCSFLPLSI*REFGRVEGHFGPINSLAFHPDGKSYASG 336
T + S C + DN I +G + C+ + ++ GH G + SL+ PD +++ SG
Sbjct: 143 TGYLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISG 202
Query: 337 GEDGYVRVHNFDQSYFDYTF 396
D ++ + TF
Sbjct: 203 ACDASAKLWDIRDGMCKQTF 222
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNF--DQSYFDYTFD 399
GH IN++AF P G ++A+G +D R+ + DQ Y+ D
Sbjct: 224 GHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHD 267
Score = 30.7 bits (66), Expect = 0.78
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 163 TWWWSRC-YGSDNHI-NQTG*IRCSFLPLSI*REFGRVEGHFGPINSLAFHPDGKSYASG 336
T + S C + DN I +G + C+ + ++ GH G + SL+ PD +++ SG
Sbjct: 143 TGYLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISG 202
Query: 337 GEDGYVRVHNFDQSYFDYTF 396
D ++ + TF
Sbjct: 203 ACDASAKLWDIRDGMCKQTF 222
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNF--DQSYFDYTFD 399
GH IN++AF P G +A+G +D R+ + DQ Y+ D
Sbjct: 224 GHESDINAVAFFPSGNRFATGSDDATCRLFDIRADQELAMYSHD 267
Score = 30.7 bits (66), Expect = 0.78
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 163 TWWWSRC-YGSDNHI-NQTG*IRCSFLPLSI*REFGRVEGHFGPINSLAFHPDGKSYASG 336
T + S C + DN I +G + C+ + ++ GH G + SL+ PD +++ SG
Sbjct: 143 TGYLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISG 202
Query: 337 GEDGYVRVHNFDQSYFDYTF 396
D ++ + TF
Sbjct: 203 ACDASAKLWDIRDGMCKQTF 222
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LIC 423
++GH ++S+ FHP+ +G ED VR+ + + + T +Y E + C
Sbjct: 225 LDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWC 276
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPD-GKSYASGGEDGYVRV 360
+ GH G + ++ P+ G+ ASGGEDG VR+
Sbjct: 340 MRGHTGQVRAITVEPERGELLASGGEDGTVRI 371
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
V H G IN+L F + + ASGG+D + RV N D+
Sbjct: 62 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDE 97
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LIC 423
+ GH P+ S F PDG+ ASG D +R+ + + +T ++ ++C
Sbjct: 101 IPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLC 152
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
+ GH GP+ +A+ D + SG D ++V
Sbjct: 398 LRGHVGPVYQVAWSADSRLLVSGSADSTLKV 428
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.26
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 286 PINSLAFHPDGKSYASGGEDGYVRV 360
P++++AFHP ++A+GG DG V +
Sbjct: 253 PVHTVAFHPKYGTFATGGADGIVNI 277
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYAS-GGEDGYVRVHNFDQSY 381
H GPI ++AF DGK A+ G EDG + QS+
Sbjct: 1244 HNGPIAAVAFSEDGKYLATYGAEDGKINFFQTSQSF 1279
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNTLVFHKI 447
I++L P G +ASGG D YV++ FD D + Y++E L + V + +
Sbjct: 126 ISALRVEPPGVRFASGGLDYYVKL--FDFQKMDMSMRYDKELLPAESHVINSL 176
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
+ H G I S+AF PD K S G D +++ + D
Sbjct: 322 KAHNGSITSIAFSPDSKRLLSRGFDDTLKMWSLD 355
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 304 FHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 396
F PDGK A+G +DG V+ + Y + +
Sbjct: 288 FSPDGKWIAAGCDDGSVQAWKYGSQYVNVNY 318
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.45
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRV 360
H P+++++F+ DG ASG DG VR+
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRI 239
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYT 393
+EGH I+S F P GK + D V++ N D + T
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERT 124
>Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical
protein C08B6.7 protein.
Length = 750
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
++ +FG + +L++ PD K A+GGED + V++
Sbjct: 343 MKSYFGGLLTLSWSPDAKLIATGGEDDLLTVYS 375
>U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical
protein F33G12.2 protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.59
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 23 DGTMFVTASKDHTAKLFDTNSLELLKEYK-TERPVNSAALSPILDHVVLGGGQDAMEVTT 199
DG VT D T KL++ LLK Y T V AA S + GG A V
Sbjct: 27 DGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRACTVFD 86
Query: 200 TST 208
T
Sbjct: 87 VET 89
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 259 FGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
F +EGH G +N+L ++ G ASG +D V++
Sbjct: 34 FHMLEGHSGCVNTLRWNKTGALLASGSDDRNVKI 67
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNTLVFH 441
GH GP+ L P G +GG DG + N S D FD ++ TL H
Sbjct: 411 GHKGPVLCLVLSPTGDHLYTGGIDGNICCFNVPSSNGD-PFDSYDPRVLTETLTGH 465
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
H ++SLA P+G SG DG +R+ N ++
Sbjct: 599 HVEGVSSLAIDPNGLYLLSGSHDGSIRMWNMEK 631
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
+ H I ++ FHP + EDG +++ N DQ
Sbjct: 355 LRSHLDSIRAMQFHPVEPVLFTASEDGLIKLWNLDQ 390
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNTLVFH 441
GH GP+ L P G +GG DG + N S D FD ++ TL H
Sbjct: 411 GHKGPVLCLVLSPTGDHLYTGGIDGNICCFNVPSSNGD-PFDSYDPRVLTETLTGH 465
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
H ++SLA P+G SG DG +R+ N ++
Sbjct: 599 HVEGVSSLAIDPNGLYLLSGSHDGSIRMWNMEK 631
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
+ H I ++ FHP + EDG +++ N DQ
Sbjct: 355 LRSHLDSIRAMQFHPVEPVLFTASEDGLIKLWNLDQ 390
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
+ H PI S++++ DG + A+ DG +RV
Sbjct: 335 IPAHSDPITSISYNHDGNTMATSSYDGCIRV 365
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 259 FGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
F ++GH G + L F D S S G D VRV + +
Sbjct: 74 FSTIKGHSGAVMDLKFTTDSSSLVSCGTDKSVRVWDME 111
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 378
++ GH G +N FHP S G D V + D S
Sbjct: 294 KLPGHMGSVNCTDFHPKEPIMLSCGSDKRVFLGEIDMS 331
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYV 354
GH +N + F DG +A+GG+DG +
Sbjct: 101 GHKKAVNCIEFSSDGLLFATGGKDGVI 127
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 274 GHFGPINSLAFHPDGKSYASGGEDGYVRV 360
GH + S+AF +G A+G EDG V++
Sbjct: 378 GHTAAVRSIAFSENGYYLATGSEDGEVKL 406
Score = 28.7 bits (61), Expect = 3.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 289 INSLAFHPDGKSYASGGEDGYVRV 360
++S+ FHPDG + +G D V++
Sbjct: 341 VHSIEFHPDGLIFGTGAADAVVKI 364
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 271 EGHFGPINSLAFHPDGKSYASGGEDGYVRV 360
+GH IN++ HPD + S D ++RV
Sbjct: 248 KGHNKKINAVVLHPDNITAISASADSHIRV 277
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 2 TDMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYK 109
TD+ S + ++VTASKD K++D S ++ +K
Sbjct: 263 TDVHYSENARLYVTASKDGHVKIWDGVSNRCVETFK 298
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 268 VEGHFGPINSLAFH--PDGKSYASGGEDGYVRV 360
V GH I+S+AF+ PD AS G+D YVR+
Sbjct: 203 VAGHTDWIHSIAFNDNPDHLLVASAGQDTYVRL 235
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYT 393
E ++ GH PI + FHP AS ED ++V +++ + T
Sbjct: 98 ETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERT 143
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSY 381
++GH +N +A GK S D +++ +F Q+Y
Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTY 181
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 424 CKLTTPYCNRKCSQSKIDQSYEHAHNHLHLRKHRTFH 314
C + + C KCS SK ++ +H H+H + F+
Sbjct: 548 CPINSKSCE-KCSHSKCEKCAKHPHHHCKCEDQKEFN 583
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 256 EFGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYT 393
E ++ GH PI + FHP AS ED ++V +++ + T
Sbjct: 98 ETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERT 143
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSY 381
++GH +N +A GK S D +++ +F Q+Y
Sbjct: 144 LKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTY 181
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 286 PINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNT 429
P+ S+ P+GK SG ED V + + + TF + L C T
Sbjct: 824 PVTSVCVDPNGKLLVSGHEDASVALFDIGGNRILQTFSFKIVFLNCQT 871
>AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical
protein Y23H5B.5 protein.
Length = 561
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 38 VTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGGQDAMEVTTTSTRQ 214
+T DH +L+D S E E E PV S P + G TT+ RQ
Sbjct: 194 LTGGYDHKVRLWDIRSKEKSLELDCEHPVESVLFLPGEQLIATAAGPIVKIWDTTTGRQ 252
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 259 FGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVH 363
+ R H G I +A+ DG+ AS G+D + VH
Sbjct: 714 YSRFVNHTGGILGIAWSADGRRIASVGKDATLFVH 748
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
R GH GP+ S+ F PD + S D VR+ + +
Sbjct: 389 RYTGHGGPVFSVNFSPDRRLLISSAGDRTVRLWSME 424
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 280 FGPINSLAFHPDGKSYASGGEDGYVRV 360
+G + + +HP+ A G +D YVRV
Sbjct: 477 YGDVGCIDYHPNCNYIAGGSDDRYVRV 503
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
R GH GP+ S+ F PD + S D VR+ + +
Sbjct: 389 RYTGHGGPVFSVNFSPDRRLLISSAGDRTVRLWSME 424
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 280 FGPINSLAFHPDGKSYASGGEDGYVRV 360
+G + + +HP+ A G +D YVRV
Sbjct: 477 YGDVGCIDYHPNCNYIAGGSDDRYVRV 503
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 381 VRLIKVMNTHITIFTSGSIGLSIWMESQTVDRTKVTFHSAK 259
V ++++++TH S + L++W + VDR+ F A+
Sbjct: 475 VFMLRMISTHAGELMSSELILALWQDFNNVDRSPTQFWDAE 515
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 381 VRLIKVMNTHITIFTSGSIGLSIWMESQTVDRTKVTFHSAK 259
V ++++++TH S + L++W + VDR+ F A+
Sbjct: 475 VFMLRMISTHAGELMSSELILALWQDFNNVDRSPTQFWDAE 515
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 27.9 bits (59), Expect = 5.5
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +2
Query: 83 SLELLKEYKTERPVNSAALSPILDHVVLGGGQDAMEV 193
+L+ ++++ ERP + + LDH++ G+D +++
Sbjct: 769 ALDCMRQHPIERPSFAELVDQFLDHLIENDGEDVLKL 805
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 259 FGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVH 363
+ R H G I +A+ DG+ AS G+D + VH
Sbjct: 714 YSRFVNHTGGILGIAWSADGRRIASVGKDATLFVH 748
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 259 FGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVH 363
+ R H G I +A+ DG+ AS G+D + VH
Sbjct: 714 YSRFVNHTGGILGIAWSADGRRIASVGKDATLFVH 748
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVR 357
H+G I ++A PD K ASGG D V+
Sbjct: 195 HYGVIFTVAVSPDQKFIASGGFDQVVK 221
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
+ GH GPI SL F + S +D V++ + DQ
Sbjct: 244 LSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWDIDQ 279
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 277 HFGPINSLAFHPDGKSYASGGEDGYVR 357
H+G I ++A PD K ASGG D V+
Sbjct: 195 HYGVIFTVAVSPDQKFIASGGFDQVVK 221
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 268 VEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 375
+ GH GPI SL F + S +D V++ + DQ
Sbjct: 244 LSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWDIDQ 279
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 295 SLAFHPDGKSYASGGEDGYVRVHNF 369
S F PD SG +DG++ V N+
Sbjct: 219 SAVFSPDANYLVSGSKDGFIEVWNY 243
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 366
+ +G G I S+ HP AS G D ++RVH+
Sbjct: 250 KFKGQAGSIRSITAHPTLPLAASVGIDRFLRVHD 283
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 23 DGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGG 175
DG+ FVT KD ++ D+++ E++ E V + D ++L G
Sbjct: 183 DGSQFVTTCKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTG 233
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 23 DGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGG 175
DG+ FVT KD ++ D+++ E++ E V + D ++L G
Sbjct: 183 DGSQFVTTCKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTG 233
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 23 DGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGG 175
DG+ FVT KD ++ D+++ E++ E V + D ++L G
Sbjct: 183 DGSQFVTTCKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTG 233
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 23 DGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVVLGGG 175
DG+ FVT KD ++ D+++ E++ E V + D ++L G
Sbjct: 183 DGSQFVTTCKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKDGLILSTG 233
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 295 SLAFHPDGKSYASGGEDGYVRVHNF 369
S F PD SG +DG++ V N+
Sbjct: 219 SAVFSPDANYLVSGSKDGFIEVWNY 243
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 5 DMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKT 112
++ + +GT F++AS D KL+DT + ++ + + T
Sbjct: 324 EVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHT 359
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 259 FGRVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
F ++GH G I + F+ D S G D VRV + +
Sbjct: 72 FAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDME 109
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 265 RVEGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 372
++ GH G +N A HP + S G D + + D
Sbjct: 292 KLPGHLGSVNCTALHPTQQILLSAGSDKTIFLGELD 327
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 316 GKSYASGGEDGYVRVHN 366
GK +A+GG DG++R+ N
Sbjct: 156 GKIFATGGADGHIRIWN 172
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 17 SRDGTMFVTASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDH 157
SRDG +T+S D++ +FD + LL + V A P D+
Sbjct: 76 SRDGRKLLTSSADNSIAMFDVLAGTLLHRIRFNSMVTFAMFHPRNDN 122
>AC006708-8|AAF60429.3| 481|Caenorhabditis elegans Hypothetical
protein Y110A7A.15a protein.
Length = 481
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 8 MQLSRDGTMFVTASKDHTAKLFDTN 82
MQ ++G + + +K H+ KLFDT+
Sbjct: 377 MQFDQNGYLLIGDAKGHSIKLFDTD 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,702,066
Number of Sequences: 27780
Number of extensions: 257096
Number of successful extensions: 975
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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