Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1198
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical pr... 32 0.52
AF101316-5|AAC69233.2| 99|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical pr... 29 4.8
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 29 4.8
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 29 4.8
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81055-9|CAB02898.3| 562|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 28 8.4
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 28 8.4
>Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical
protein F26D2.7 protein.
Length = 341
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = -1
Query: 513 QELIVKNKRFERSQVLAFVVEWIDENKELEWE--STFSTSRQHESFRHVTELFRHIKRYF 340
+E+I KN FE S V F++ +EN ++W+ S ++ F++ +F +K YF
Sbjct: 163 REVIRKNFDFEISSVARFIMMPYNENNTIQWKALSLLISAGILICFQYFIFVFFGLKIYF 222
Query: 339 SFVEHLHNFS 310
+ L +FS
Sbjct: 223 NMKLRLKSFS 232
>AF101316-5|AAC69233.2| 99|Caenorhabditis elegans Hypothetical
protein F52F10.1 protein.
Length = 99
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 757 LFFLNHNSYT*SFYIFFGYYGCKIHQ 680
++F NHNS + F++ F C+ HQ
Sbjct: 21 IYFFNHNSVSFQFFLVFQKLTCRSHQ 46
>Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical
protein F55C9.7 protein.
Length = 523
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Frame = -2
Query: 710 LWILRMQN----SSVYLNL---IFWNNIRLCVIRRNIEFVREPFTLVVNENILEIHV 561
+W+ R+ N S +YL+L WNN +C RRN+ ++ T +++ N +HV
Sbjct: 377 VWLQRIVNQFSGSFLYLDLDVNSIWNNQIMCTNRRNL-YISTSCTELLSVNCTHLHV 432
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Frame = +1
Query: 250 EQIIRNSNEFVIFKEDSVPMTEIMKMLDEG----KVPFDMSEEFCYMP-----KRLMLPR 402
EQ R+ ++ V ++P TE++ L K+PF S E Y P +RL LP
Sbjct: 713 EQTTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPS 772
Query: 403 GTEGG 417
G E G
Sbjct: 773 GVEIG 777
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Frame = +1
Query: 250 EQIIRNSNEFVIFKEDSVPMTEIMKMLDEG----KVPFDMSEEFCYMP-----KRLMLPR 402
EQ R+ ++ V ++P TE++ L K+PF S E Y P +RL LP
Sbjct: 713 EQTTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPS 772
Query: 403 GTEGG 417
G E G
Sbjct: 773 GVEIG 777
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/46 (26%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 5 VYFSKEEIKN-NHVHDVKVRQPRLNHSPFNVNIEVDSNVASDAVVK 139
V+ S E+I+ VHD+++ ++ +V++E+D+N S ++++
Sbjct: 278 VFSSLEDIEGVKKVHDLRIWSLTMDKIALSVHLEIDANSQSQSILR 323
>Z81055-9|CAB02898.3| 562|Caenorhabditis elegans Hypothetical
protein F01G10.10 protein.
Length = 562
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2
Query: 650 IRLCVIRRNIEFVREPFTLVVNENILEIHVRNLE*CINNGAI 525
I L ++ + ++RE V+NE IL++ + N+ I NG +
Sbjct: 39 IYLRIMPNGLAYLREVGMKVINEQILKLQLPNIREPIENGEV 80
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 498 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 328
K + E S V+ V I+ +KE+ S F + +F H TE++R++ Y E
Sbjct: 47 KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 498 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 328
K + E S V+ V I+ +KE+ S F + +F H TE++R++ Y E
Sbjct: 47 KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,762,067
Number of Sequences: 27780
Number of extensions: 399791
Number of successful extensions: 1029
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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