Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1196
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   3.6  
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro...    29   8.2  
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P...    29   8.2  

>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 425 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 333
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein.
          Length = 1872

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
 Frame = -3

Query: 621  SPRSKWASTSRLAF*MRNATSKVTLFRASRLSGLH-SEQSLPDSARLASALEAFRHNPAD 445
            S RS  AS +R      NA S+      S    LH S  S  +S R   +  A R  P+ 
Sbjct: 849  SGRSSRASITRSPSRTMNAGSR------SPSRSLHPSRTSSRESGRPGDSRSASRGPPSR 902

Query: 444  GTSHHRPLG-RVHEPNVR-NCGSSRTEQYYYRNDKPSVG*N*PVSRRSNPAH 295
              S    +G R+  PN R    SSR E+   R D+PS   +   SR ++PA+
Sbjct: 903  PGSRLDQIGSRMDRPNSRLERSSSRAERSSSRADRPSSRFDVSNSRGNSPAN 954


>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
           protein.
          Length = 1895

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -3

Query: 546 FRASRLSGLHSEQSLPDSARLASALEAFRHNPADGTSHH 430
           +R  R+ G HS ++LP+  R      A+  + +DG S++
Sbjct: 763 YRGYRIQGPHSPRNLPNQCRYGPIGSAYTGDNSDGNSNN 801


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,025,427
Number of Sequences: 53049
Number of extensions: 708508
Number of successful extensions: 2073
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)