Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1192
(565 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa... 60 3e-08
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 60 3e-08
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 55 1e-06
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve... 54 2e-06
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN... 51 2e-05
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu... 48 2e-04
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo... 38 0.16
UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole... 38 0.21
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep... 36 0.86
UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q7QSD5 Cluster: GLP_426_32236_31316; n=1; Giardia lambl... 34 2.0
UniRef50_UPI0000DB7C0A Cluster: PREDICTED: similar to CG9965-PA,... 32 8.1
>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
Aa1-330 - Rattus norvegicus (Rat)
Length = 151
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -1
Query: 247 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSR-SEPYLPSIGFHGTR 71
RLFTLETCCGYGY PAR L HP P + + + R + + + P L + F G
Sbjct: 25 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 82
Query: 70 TLRQKRKLFPDLSAASSGHFGLP 2
+KR+L P L AS G LP
Sbjct: 83 PFTKKRELSPGLPPASPGSVALP 105
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -1
Query: 247 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSR-SEPYLPSIGFHGTR 71
RLFTLETCCGYGY PAR L HP P + + + R + + + P L + F G
Sbjct: 95 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 152
Query: 70 TLRQKRKLFPDLSAASSGHFGLP 2
+KR+L P L AS G LP
Sbjct: 153 PFTKKRELSPGLPPASPGSVALP 175
>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 144
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/81 (41%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -1
Query: 343 QTRHAPVLRANPYSEVTDPICRLPLPTLFYD*RLFTLETCCGYGYEPARHLHVHPSPEFS 164
Q H P+LRANPY EVTD CRLPL TLFY L P + PS FS
Sbjct: 58 QGPHCPILRANPYPEVTDLFCRLPLSTLFYQLEAVHLGDLLRLSVRPG--MKTIPSCGFS 115
Query: 163 RSAESIRTPPQ-MRCSSRSEP 104
R+ P Q + SS P
Sbjct: 116 RAVAGAPDPAQGLGSSSHKTP 136
>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 123
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/60 (50%), Positives = 34/60 (56%)
Frame = -1
Query: 328 PVLRANPYSEVTDPICRLPLPTLFYD*RLFTLETCCGYGYEPARHLHVHPSPEFSRSAES 149
P LRANP+ EVTD CRLPLPTLFY L P ++V PEFSR+ ES
Sbjct: 63 PTLRANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLVRPDTKINVF--PEFSRAVES 120
>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence; n=3;
Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 136
Score = 50.8 bits (116), Expect = 2e-05
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 GNPKWPEDAAERSGKSFLFCLSVRVPWNPIEGRYGSEREEHRICGGVRILSA-DLENSGE 179
GN P +A G+S LF + R PWN R G + + S L+ G
Sbjct: 50 GNATDPGEAGGSPGESSLFFVKGRAPWNGFAPREGPVPWKASRFRRRPVSSRWPLKIRGR 109
Query: 180 GCTWRCRAGSYPYPQQVSKVKSL 248
GC + RAG YPYPQQVSKV SL
Sbjct: 110 GC--KSRAGPYPYPQQVSKVNSL 130
>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
Euteleostomi|Rep: RRNA promoter binding protein - Rattus
norvegicus (Rat)
Length = 295
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/85 (40%), Positives = 41/85 (48%)
Frame = -2
Query: 357 IRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSTTRGSSPWRPAADMGTNRRDISTYIP 178
+R P++P P EPILIPKLRI+ ADFPYLH S + + T P
Sbjct: 146 LRAPARPTQPL--EPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPGARFTPSP 203
Query: 177 HLNFQGPQRVSGHRRKCGALRVPNH 103
+FQGP R HR R P H
Sbjct: 204 P-DFQGPAR--AHRTPPEPRRFPRH 225
>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
tabacum (Common tobacco)
Length = 530
Score = 37.9 bits (84), Expect = 0.16
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3
Query: 323 PQSQSLFRSYGSNLPTSLTYII 258
PQSQS RSYGS LPTSL YI+
Sbjct: 224 PQSQSFSRSYGSILPTSLAYIV 245
>UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7818,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 563
Score = 37.5 bits (83), Expect = 0.21
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = -2
Query: 264 HYSTTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSGHRRKCGALRVP 109
H RG + RP + R ST H NF P SGH+ CGAL+VP
Sbjct: 248 HLPRPRGGAGPRPGGGLAAFSRSSSTSSDHGNFAMP---SGHQATCGALKVP 296
>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
acetyl choline receptor - Acheta domesticus (House
cricket)
Length = 39
Score = 35.5 bits (78), Expect = 0.86
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1
Query: 301 EVTDPICRLPLPTLFY 254
EVTDPICRLPLPT Y
Sbjct: 16 EVTDPICRLPLPTFVY 31
>UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 39
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 254 VE*CR*GKSANWIRNFGIRIGSE 322
+E CR GKSA IRNFG RIGSE
Sbjct: 1 MEQCRQGKSAKRIRNFGKRIGSE 23
>UniRef50_Q7QSD5 Cluster: GLP_426_32236_31316; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_32236_31316 - Giardia lamblia
ATCC 50803
Length = 306
Score = 34.3 bits (75), Expect = 2.0
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -2
Query: 396 HNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSTTRGSSPWRPAAD 217
H+ R ST P + ++ S P S++P L P D Y + T SSP RP+
Sbjct: 58 HSYRHSTPPSSRQVLNISAPTA--STKPDL-PYFIDPCID-QYANLDLTEPSSP-RPSRT 112
Query: 216 MGTNRRDI--STYIPHLNFQGPQRVS 145
T+ I +TYIPH F+GP +++
Sbjct: 113 PTTSEEPIRYNTYIPHPRFRGPNKLT 138
>UniRef50_UPI0000DB7C0A Cluster: PREDICTED: similar to CG9965-PA,
partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
CG9965-PA, partial - Apis mellifera
Length = 271
Score = 32.3 bits (70), Expect = 8.1
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -2
Query: 264 HYSTTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSGHRRKCGALRVPNHISLL*D 85
+Y RG P+ + + R I+ ++ N GP+ +GHRR+ + +SL D
Sbjct: 30 YYGGLRGGKPFTSNNSLASATRIINHHLFGSNI-GPRHYTGHRRQISETNTESKLSLSVD 88
Query: 84 SMELE 70
S++ E
Sbjct: 89 SIDSE 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,779,706
Number of Sequences: 1657284
Number of extensions: 13086847
Number of successful extensions: 41250
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 39448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41221
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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