Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1192
(565 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 32 0.30
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 32 0.30
At2g45560.1 68415.m05665 cytochrome P450 family protein 30 0.93
At1g76965.1 68414.m08961 glycine-rich protein 30 1.2
At3g06360.1 68416.m00734 arabinogalactan-protein (AGP27) 29 2.1
At1g18700.1 68414.m02333 DNAJ heat shock N-terminal domain-conta... 29 2.1
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 2.8
At2g19150.1 68415.m02235 pectinesterase family protein contains ... 29 2.8
At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative... 28 3.7
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 3.7
At3g25250.1 68416.m03154 protein kinase family protein contains ... 28 5.0
At5g22390.1 68418.m02612 expressed protein 27 6.5
At1g66880.1 68414.m07601 serine/threonine protein kinase family ... 27 6.5
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 27 6.5
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 27 8.7
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 27 8.7
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 31.9 bits (69), Expect = 0.30
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -2
Query: 438 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 262
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
Query: 261 YSTTRGSSP 235
T G+SP
Sbjct: 409 --ITPGASP 415
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 31.9 bits (69), Expect = 0.30
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -2
Query: 438 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 262
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
Query: 261 YSTTRGSSP 235
T G+SP
Sbjct: 409 --ITPGASP 415
>At2g45560.1 68415.m05665 cytochrome P450 family protein
Length = 512
Score = 30.3 bits (65), Expect = 0.93
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +1
Query: 343 GREADAAGAGSGRCSCVMFVLAS*YFNIMRPQKLYIFNMTLAKIVLRFGLDPDPRF 510
GR+ + G+GR C LA ++M LY F+ L K VL LD D F
Sbjct: 435 GRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETF 490
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 372 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSTTRGSSPWRPAADM 214
PG + FP KP+ P P +P+L + F D L +T + P ++
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGDDRRLLENTVCEHMRYNPTPEL 145
>At3g06360.1 68416.m00734 arabinogalactan-protein (AGP27)
Length = 125
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 493 DPDPRFRPSADLPSRKVVSVSFRA 564
DPDP F PSA P+ + S+S +A
Sbjct: 77 DPDPAFAPSASPPASSLASLSSQA 100
>At1g18700.1 68414.m02333 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI8
DnaJ homolog subfamily B member 7 Mus musculus; contains
Pfam profile PF00226 DnaJ domain
Length = 700
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 428 CGLKNCIYLI*HSRKSSYVSDWIRTRVSGLPRIF 529
C +C+ + ++DW T V GLPR+F
Sbjct: 234 CKTADCLIRFEGELSADAITDWFATTVLGLPRVF 267
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 159 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 25
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At2g19150.1 68415.m02235 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 339
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 129 ICGGVRILSADLENSGEGCTWRCRAGSYPYPQQV 230
I GG+ + ++ EGCT + R G YP P +V
Sbjct: 185 ISGGIDFIFGGAQSIFEGCTLKLRVGIYP-PNEV 217
>At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 239
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 504 RVRIQSET*DDFRECHIKYIQFLRPH 427
R+RIQ DF + + K+++FL PH
Sbjct: 172 RIRIQGFVVSDFYDEYSKFLEFLHPH 197
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 154 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 56
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At3g25250.1 68416.m03154 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 421
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = -1
Query: 310 PYSEVTDPICRLPLPTLFYD*RLFTLETCCGYGYEPARHLHVHPSPEFSRSAES 149
P + P P PT+ RLF + C G P + VH S + S S
Sbjct: 176 PRTPQPSPSLSKPSPTMKRKKRLFRFTSFCNSGISPQESISVHSSSTLAVSDSS 229
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 33 ERSGKSFLFCLSVRVPWNPIEG 98
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At1g66880.1 68414.m07601 serine/threonine protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 1296
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 433 PQKLYIFNMTLAKIVLRFGLDPDPRFRPSADLPSRKVVSVS 555
P K++ + T + + + DP +R S P R +VSVS
Sbjct: 493 PSKIFEISSTYKSLTVFYLCDPKVSYRSSYTCPGRGLVSVS 533
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 196 HLHVHPSPEFSRSAESIRTPPQMRCSSRSE 107
H H +P+ S S S+RTPP R +SR E
Sbjct: 229 HYHSTSTPQPSVSNFSLRTPPVDRSASRLE 258
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 412 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 287
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 412 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 287
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,130,831
Number of Sequences: 28952
Number of extensions: 285305
Number of successful extensions: 872
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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