Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1190
(739 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po... 32 0.71
AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA... 32 0.71
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 29 5.0
AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-P... 29 5.0
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P... 29 5.0
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P... 29 5.0
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 29 5.0
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 6.6
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 6.6
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 6.6
>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
polyposis coli protein.
Length = 2416
Score = 32.3 bits (70), Expect = 0.71
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = -3
Query: 608 APADIIDRAPLPPNRVSNETMKVVVFQRRSRETTPTYATPLMSPYNARLESSSTGSSFPA 429
APA + + + +N ++V V + + +T+PT+ S + ++S GS A
Sbjct: 2220 APARLERQGTFVKDEPTNSNVQVPVVETKPAQTSPTHRA---SKLPTKKGTASGGSPSKA 2276
Query: 428 DSPKPVPLA 402
SPK +PLA
Sbjct: 2277 GSPKRIPLA 2285
>AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA
protein.
Length = 2417
Score = 32.3 bits (70), Expect = 0.71
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = -3
Query: 608 APADIIDRAPLPPNRVSNETMKVVVFQRRSRETTPTYATPLMSPYNARLESSSTGSSFPA 429
APA + + + +N ++V V + + +T+PT+ S + ++S GS A
Sbjct: 2221 APARLERQGTFVKDEPTNSNVQVPVVETKPAQTSPTHRA---SKLPTKKGTASGGSPSKA 2277
Query: 428 DSPKPVPLA 402
SPK +PLA
Sbjct: 2278 GSPKRIPLA 2286
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 29.5 bits (63), Expect = 5.0
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = -3
Query: 719 SQTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNE--TM 546
S +P A S R+ A +V A S + +G + P + P P R S++
Sbjct: 83 SSSPGEAASVMRVQLFGVIAVAVVAVSLVRDVGAE--PPVNNAYLPPSSPQRPSSKYGAP 140
Query: 545 KVVVFQRRSRETTPTYATPLMSPYNARLESSSTGSSFPADSPKP 414
V + + P++ + S Y A +S+S+G +PA +P+P
Sbjct: 141 PVSSYLPPASGPAPSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184
>AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-PE,
isoform E protein.
Length = 2403
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 141 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 34
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 1433 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469
>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
isoform D protein.
Length = 7210
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 141 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 34
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 6240 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276
>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
isoform C protein.
Length = 4463
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 141 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 34
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 1433 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 141 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 34
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 6240 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 614 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 510
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 614 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 510
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 614 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 510
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,822,671
Number of Sequences: 53049
Number of extensions: 809972
Number of successful extensions: 2795
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2793
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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