Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1189
         (716 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38317| Best HMM Match : bZIP_2 (HMM E-Value=5.1e-14)                40   0.002
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.005
SB_19296| Best HMM Match : bZIP_2 (HMM E-Value=1.1e-08)                37   0.014
SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.014
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)                33   0.23 
SB_51988| Best HMM Match : bZIP_2 (HMM E-Value=7.3e-13)                33   0.23 
SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06)                32   0.53 
SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.53 
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)                  31   0.93 
SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09)                   31   0.93 
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_5481| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.2  
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.2  
SB_57900| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_19105| Best HMM Match : 7tm_1 (HMM E-Value=5e-08)                   29   2.8  
SB_41081| Best HMM Match : DUF1014 (HMM E-Value=2.9)                   29   3.8  
SB_55083| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  
SB_8304| Best HMM Match : PLAT (HMM E-Value=0)                         28   8.7  

>SB_38317| Best HMM Match : bZIP_2 (HMM E-Value=5.1e-14)
          Length = 561

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +1

Query: 94  SIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 249
           S+ +  +++ T++  YRE R KNN ++KRSR  RK++E+  +  A  L++ N
Sbjct: 278 SLSKAIADVKTEQ--YREKRRKNNASAKRSREARKMREIHAQTAAAYLQDEN 327


>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 443

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = +1

Query: 121 STQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 249
           + +++KY E R +NN ++KRSR  R+++EL+ +  A  LEE N
Sbjct: 154 NNKDNKYWEKRQRNNASAKRSRDARRVRELECQIRAEFLEEEN 196


>SB_19296| Best HMM Match : bZIP_2 (HMM E-Value=1.1e-08)
          Length = 216

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = +1

Query: 127 QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN 255
           ++ KY E R KNN A+KRSR  ++ +E++  Q  + LE+ N +
Sbjct: 170 KDQKYIEKRMKNNLAAKRSREAKRQREIEAMQKTLTLEKENSD 212


>SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 815

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = +1

Query: 127 QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN 255
           ++ KY E R KNN A+KRSR  ++ +E++  Q  + LE+ N +
Sbjct: 51  KDQKYIEKRMKNNLAAKRSREAKRQREIEAMQKTLTLEKENSD 93


>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
          Length = 278

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +1

Query: 73  STLSSTCSIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
           S  S   SI + +S +     +YR+ R++NN A ++SR   K K ++ +    +L E N+
Sbjct: 178 SRTSRRHSISKRNS-MDKHSEEYRQKRERNNVAVRKSRFKSKQKFIETQSRVEELTEENE 236


>SB_51988| Best HMM Match : bZIP_2 (HMM E-Value=7.3e-13)
          Length = 244

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +1

Query: 127 QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
           ++ KY E R +NN A+KRSR  ++ KE+ + + A +LE  N+
Sbjct: 177 KDQKYWERRFENNVAAKRSRDLKRPKEMTVAKRAQNLEIENE 218


>SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06)
          Length = 222

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 145 ELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
           E R KNNEASKR+R  R+ KE ++ +     E+ NK
Sbjct: 159 EKRRKNNEASKRTREKRRNKEQELLKEKEIKEKENK 194


>SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1434

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +1

Query: 94   SIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
            SI   S +IS +E   R+ +D N + +K+ +    + E   E+L  DL+E+N+
Sbjct: 1252 SIQRLSFDISPEECACRKQQDSNADRAKQIKTTATVNEDPTEKLIRDLQEQNE 1304


>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
          Length = 298

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 127 QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 249
           ++ +Y   R KNN A++RSR  R+ KE+++      LE+ N
Sbjct: 167 KDDRYWARRVKNNVAARRSRDMRRQKEIEISMKWKQLEKEN 207


>SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09)
          Length = 241

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 112 SNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 249
           S+ S    K  E R +NN+ASK+ R  RK K+  +     +LE  N
Sbjct: 170 SSSSGDSDKSEEKRKRNNQASKKFRQARKGKQQALFAKESELEREN 215


>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 482

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +1

Query: 79  LSSTCSIDENSSNISTQ-ESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN 255
           L    ++ E+  N + Q  +K RE+  ++ E + R+   RK++E++  Q  I  EERN+ 
Sbjct: 163 LEDVQALQEDERNKTLQVRNKQREVEIEHREYAARAE--RKMREVEERQRLIAEEERNRQ 220

Query: 256 *ELKQI 273
            EL Q+
Sbjct: 221 -ELAQL 225


>SB_5481| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 366

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -2

Query: 457 TCIVLLCSLVKTEKSTVVDL-LSN-KMQMLMSFNNTQNIHNLLHFCK 323
           T I L   +V T K T++D  +SN K + L +F+NT  IH+ +   K
Sbjct: 206 TTIHLPFIIVNTSKKTIIDCSISNDKFEYLFNFDNTFEIHDDIEVLK 252


>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1106

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 112  SNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
            S +  +ESK RE +DK  E  +R    +K ++ Q  +   +  ER +
Sbjct: 975  SEVDAEESKKREKKDKEKEKRERELQRKKERDEQKRKKEEEKREREE 1021


>SB_57900| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 114

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 103 ENSSNISTQESKYRELRDKNNEASKRSRMNR--KLKELQMEQLAIDLEERNK 252
           E S N++TQ++   EL     E  K SRM +  + +   M +L  DL+  NK
Sbjct: 4   EESENMATQDNNDEELHPATQEEEKPSRMTQFPQTRVRNMMKLDPDLQLANK 55


>SB_19105| Best HMM Match : 7tm_1 (HMM E-Value=5e-08)
          Length = 791

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 35  GPEEEADPPRDETAHYHPHAALM 103
           G E +A+P  DE  H++PHAAL+
Sbjct: 500 GDENDAEPSSDE--HFYPHAALL 520


>SB_41081| Best HMM Match : DUF1014 (HMM E-Value=2.9)
          Length = 340

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 41  EEEADPPRDETAHYHPHAALMKIHQIFPLKNQSIES*ETRIMKL 172
           E +++ PR E+A  + HA +  IH   P +++S+     R+M+L
Sbjct: 288 EPKSESPRSESADGNGHALMDVIHDGSPDEDRSVALGRERVMRL 331


>SB_55083| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 185

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 421 EKSTVVDLLSNKMQML-MSFNNTQNIHNLLHFCKIAAINASFTFL 290
           E S  +  L N + +L + F N+Q +HN+ +     +I+ S TFL
Sbjct: 119 ELSIDISCLENTILLLSVDFPNSQLVHNIFNVLSTESIDYSLTFL 163


>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
          Length = 1182

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 130 ESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
           E +Y E + K  +  KR    RKL+E ++ Q+  D +E+ +
Sbjct: 727 EKRYEEEKQKIEDDKKRWEEERKLREDEINQMFNDDQEKRE 767


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,727,488
Number of Sequences: 59808
Number of extensions: 365664
Number of successful extensions: 1198
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)