Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1189
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical ... 39 0.003
Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical pr... 38 0.009
U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein. 38 0.009
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 36 0.022
AC024799-8|AAW88387.1| 297|Caenorhabditis elegans Hypothetical ... 31 0.82
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 30 1.9
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 30 1.9
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 30 1.9
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 29 2.5
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 29 4.4
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 4.4
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 4.4
AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 29 4.4
AF045644-4|AAC02599.1| 211|Caenorhabditis elegans Onchocerca re... 29 4.4
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 4.4
Z83107-8|CAB05504.1| 348|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81078-1|CAB03075.3| 441|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical pr... 28 7.7
DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian str... 28 7.7
AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical ... 28 7.7
AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical ... 28 7.7
AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical ... 28 7.7
>U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical
protein K02F3.4 protein.
Length = 308
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 73 STLSSTCSIDENSSNISTQESK-YRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEER 246
ST+ +T + +S++S+ S YR RDKNN AS++SR R+ K + ++ LE+R
Sbjct: 222 STVETTITRGRKTSSVSSDSSSDYRHKRDKNNLASQKSRQKRQAKIRESKEERERLEKR 280
>AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical
protein F17A9.3 protein.
Length = 241
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 139 YRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 249
Y E R KNN+A+KRSR R++KE +M A LE N
Sbjct: 119 YWERRRKNNDAAKRSRDQRRMKEDEMAHRATSLEREN 155
>Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical
protein ZK909.4 protein.
Length = 211
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 127 QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 249
++S Y E R KNN+A+KRSR R+ KE Q+ A LE N
Sbjct: 115 KDSAYFERRRKNNDAAKRSRDARRQKEEQIASKAHALEREN 155
>U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein.
Length = 211
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 127 QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 249
++S Y E R KNN+A+KRSR R+ KE Q+ A LE N
Sbjct: 115 KDSAYFERRRKNNDAAKRSRDARRQKEEQIASKAHALEREN 155
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 106 NSSNIST-QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
NS N S ++ Y E R +NN+AS+RSR R+ +L ME+ + L N+
Sbjct: 45 NSVNESVIKDEHYWERRRRNNDASRRSREKRRQNDLAMEEKIMLLSAENE 94
Score = 34.7 bits (76), Expect = 0.067
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 103 ENSSNISTQESKYRELRDKNNEASKRSRMNRK 198
E+ SN S + +Y + R +NNEA+KR R NR+
Sbjct: 320 EDHSNYSNKSPQYVDRRRRNNEAAKRCRANRR 351
>AC024799-8|AAW88387.1| 297|Caenorhabditis elegans Hypothetical
protein Y49C4A.2 protein.
Length = 297
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = -3
Query: 693 LGKYNIVVILFNCHIQTIVGKNIFLMINNKNVKQNQRISFVTLIHLISR 547
+G YN + +F C I+TI+ ++ +M + + +N + ++ + ISR
Sbjct: 246 VGPYNFYLKIFGCSIETIIVSSV-IMRSKSKISKNSPVIAISRVTAISR 293
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 100 DENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
+E + + E + R R+K E K+ + ++ ++L+ EQ ++EER +
Sbjct: 66 EEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEMEERRR 116
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 100 DENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
+E + + E + R R+K E K+ + ++ ++L+ EQ ++EER +
Sbjct: 900 EEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEMEERRR 950
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 100 DENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
+E + + E + R R+K E K+ + ++ ++L+ EQ ++EER +
Sbjct: 66 EEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEMEERRR 116
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 97 IDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
++E + + K +L K E +RS RK KE E+ EE+ K KQI
Sbjct: 922 VEEQRKREAEDKEKIEQLNAKVREKEERSEARRKQKEKDDEEEKRLYEEKEKEQRKKQI 980
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 109 SSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQ 222
S NI+ + K +ELR ++ EA +++ M K+K ++EQ
Sbjct: 106 SMNIA-HDLKMKELRSESKEAREKAEMEHKMKVEKVEQ 142
>Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical
protein T01E8.2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 118 ISTQESKYRELRDKNNEASKRSRMNRKLKELQM 216
IST Y R + E +R +N K+KELQ+
Sbjct: 4 ISTPPPAYAHNRKTSQEKKRRDEINAKIKELQL 36
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 612 NNKNVKQNQRISFVTLIHLIS 550
NN+N+ N+R + VTL HL++
Sbjct: 799 NNRNITTNERAASVTLFHLVT 819
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 612 NNKNVKQNQRISFVTLIHLIS 550
NN+N+ N+R + VTL HL++
Sbjct: 799 NNRNITTNERAASVTLFHLVT 819
>AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein.
Length = 367
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 118 ISTQESKYRELRDKNNEASKRSRMNRKLKELQM 216
IST Y R + E +R +N K+KELQ+
Sbjct: 4 ISTPPPAYAHNRKTSQEKKRRDEINAKIKELQL 36
>AF045644-4|AAC02599.1| 211|Caenorhabditis elegans Onchocerca
related antigen familyprotein 1 protein.
Length = 211
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +1
Query: 127 QESKYRELRDKNNEASKRSRM-NRKLKELQMEQLAIDLEERNKN*ELKQIF--WKS*P 291
+E + +E +DK ++ S +++ N KL+ L ++ AI LEE ++N + ++F WKS P
Sbjct: 149 KEKEMQEYKDKESKLSAAAKVANEKLEALGKQKFAI-LEELDENVK-DELFDLWKSRP 204
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 612 NNKNVKQNQRISFVTLIHLIS 550
NN+N+ N+R + VTL HL++
Sbjct: 799 NNRNITTNERAASVTLFHLVT 819
>Z83107-8|CAB05504.1| 348|Caenorhabditis elegans Hypothetical
protein F32A7.7 protein.
Length = 348
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 526 IYRYIILSRNKMY*CNKTYSLVLLYIF 606
IYRY++LSRNKM + ++V + +F
Sbjct: 109 IYRYLVLSRNKMLRHHDGRTIVYMILF 135
>Z81078-1|CAB03075.3| 441|Caenorhabditis elegans Hypothetical
protein F36H2.2 protein.
Length = 441
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 558 DVLM*QNLFFGFALHFCCLSLKKYFSL 638
DV++ ++FGF+L C +SL Y+ L
Sbjct: 191 DVILNGQMYFGFSLIMCFISLATYYYL 217
>Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical
protein C55A6.9 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 601 IFVVYH*KNIFPYNCLDMAIK 663
+F++YH N+F YN +D +K
Sbjct: 301 VFIMYHRNNVFQYNEVDCNVK 321
>DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian
stromal interaction molecule-1 protein.
Length = 530
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 112 SNISTQESKYRELRDK-NNEASKRSRMNRKLKELQMEQLAIDLEERNKN*E 261
+ + E+++ +++ N+E SKRS + + +ME L + LEE + E
Sbjct: 228 TELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRLE 278
>AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1c protein.
Length = 395
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 112 SNISTQESKYRELRDK-NNEASKRSRMNRKLKELQMEQLAIDLEERNKN*E 261
+ + E+++ +++ N+E SKRS + + +ME L + LEE + E
Sbjct: 228 TELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRLE 278
>AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1a protein.
Length = 530
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 112 SNISTQESKYRELRDK-NNEASKRSRMNRKLKELQMEQLAIDLEERNKN*E 261
+ + E+++ +++ N+E SKRS + + +ME L + LEE + E
Sbjct: 228 TELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRLE 278
>AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 112 SNISTQESKYRELRDK-NNEASKRSRMNRKLKELQMEQLAIDLEERNKN*E 261
+ + E+++ +++ N+E SKRS + + +ME L + LEE + E
Sbjct: 228 TELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRLE 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,333,432
Number of Sequences: 27780
Number of extensions: 307490
Number of successful extensions: 955
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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