Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1189
(716 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 29 0.033
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 0.94
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 24 1.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 24 1.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 1.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.0
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 8.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 8.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.8
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 29.5 bits (63), Expect = 0.033
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 106 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN 255
N S+ S + K+++LR+++NE RSR + + + E I E ++
Sbjct: 4 NISSYSHHDEKFKQLRNEDNEIDLRSRTKEERLQHRREAWLIQQEREREH 53
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 24.6 bits (51), Expect = 0.94
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 333 ISVKLQPSMHLLLFWSALPKYLL*LLVFISFF 238
+S KLQ ++ +F + LP L+ +L ++SF+
Sbjct: 233 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFW 264
Score = 21.8 bits (44), Expect = 6.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 369 ALTIHKIFTICFISVKLQPSMHLLLFWSALPKYLL*LLVFI 247
AL I + T+ IS ++ S+ + + A+ YL+ VF+
Sbjct: 275 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 315
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 103 ENSSNISTQESKYRELRDKNNEASKRSRMNRKLKE 207
E N E +YR+ R+ + E S+ + K KE
Sbjct: 44 EREQNSYKNEREYRKYRETSKERSRDRKEREKSKE 78
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 103 ENSSNISTQESKYRELRDKNNEASKRSRMNRKLKE 207
E N E +YR+ R+ + E S+ + K KE
Sbjct: 44 EREQNSYKNEREYRKYRETSKERSRDRKEREKSKE 78
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 103 ENSSNISTQESKYRELRDKNNEASKRSRMNRKLKE 207
E N E +YR+ R+ + E S+ + K KE
Sbjct: 44 EREQNSYKNEREYRKYRETSKERSRDRKEREKSKE 78
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 103 ENSSNISTQESKYRELRDKNNEASKRSRMNRK 198
E N E +YR+ R+++ E S R R R+
Sbjct: 277 EREQNSYKNEREYRKYRERSKERS-RDRTERE 307
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 434 TT*QDNACCILARIVSILNKNNLDYHKKN 520
TT +DN + A+ ++ L K+++ H KN
Sbjct: 412 TTEKDNNEIVTAQFLNQLKKSSVLVHTKN 440
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 154 DKNNEASKRSRMNRKLKELQME-QLAIDLEERN 249
D+N K+S++N L ELQ + +D+ E++
Sbjct: 301 DENVVTDKKSKVNFALPELQHNLNILVDMCEQD 333
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 130 ESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
E+ YR+ R+ + E S+ + + KE ++ + N N K++
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 130 ESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
E+ YR+ R+ + E S+ + + KE ++ + N N K++
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 130 ESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
E+ YR+ R+ + E S+ + + KE ++ + N N K++
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 130 ESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
E+ YR+ R+ + E S+ + + KE ++ + N N K++
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 130 ESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
E+ YR+ R+ + E S+ + + KE ++ + N N K++
Sbjct: 286 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,597
Number of Sequences: 438
Number of extensions: 4666
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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