Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1189
         (716 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical...    31   0.58 
At5g44080.1 68418.m05393 bZIP transcription factor family protei...    31   0.76 
At1g68880.1 68414.m07883 bZIP transcription factor family protei...    31   1.0  
At3g58840.1 68416.m06558 expressed protein                             30   1.3  
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill...    30   1.3  
At5g02310.1 68418.m00154 eceriferum3 protein, putative similar t...    29   2.3  
At1g68640.1 68414.m07843 bZIP family transcription factor (PERIA...    29   3.1  
At1g54570.1 68414.m06223 esterase/lipase/thioesterase family pro...    28   5.4  
At5g13640.1 68418.m01582 lecithin:cholesterol acyltransferase fa...    27   9.4  
At4g34000.2 68417.m04825 ABA-responsive element-binding protein ...    27   9.4  
At4g34000.1 68417.m04824 ABA-responsive element-binding protein ...    27   9.4  
At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger) fa...    27   9.4  

>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
           G-box binding factor 4 (GBF4) SP:P42777 from
           [Arabidopsis thaliana]
          Length = 270

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +1

Query: 157 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
           KN E++ RSR  ++  ++++E LA  LEE N+   LK+I
Sbjct: 196 KNRESAARSRERKQAYQVELETLAAKLEEENEQ-LLKEI 233


>At5g44080.1 68418.m05393 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription factor
          Length = 315

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +1

Query: 157 KNNEASKRSRMNRKLKELQMEQLAIDLEERNK 252
           KN E++ RSR  ++  ++++E LA  LEE N+
Sbjct: 240 KNRESAARSRERKQAYQVELEALAAKLEEENE 271


>At1g68880.1 68414.m07883 bZIP transcription factor family protein
           similar to common plant regulatory factor 6 GI:9650826
           from [Petroselinum crispum]; contains Pfam profile:
           PF00170 bZIP transcription factor
          Length = 138

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/59 (23%), Positives = 32/59 (54%)
 Frame = +1

Query: 79  LSSTCSIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN 255
           LS+  +  ++SS  +    + R  +  N E+++RSRM ++    ++  + + L  +NK+
Sbjct: 28  LSNLPATSDDSSRTAEDNERKRRRKVSNRESARRSRMRKQRHMEELWSMLVQLINKNKS 86


>At3g58840.1 68416.m06558 expressed protein
          Length = 318

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +1

Query: 100 DENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEE-RNKN*ELKQIF 276
           D +   + T E + R++ D  N+  + +R NR+LKE ++E+L  ++EE ++   E+ Q F
Sbjct: 14  DYDQGGVKTTELE-RKIEDMENKNQELTRENRELKE-RLERLTGEIEEMKDVEAEMNQRF 71


>At1g44120.1 68414.m05096 C2 domain-containing protein /
            armadillo/beta-catenin repeat family protein similar to
            CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
            profiles PF00514: Armadillo/beta-catenin-like repeat,
            PF00168: C2 domain
          Length = 2114

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 460  ATCIVLLCSLVKTEKSTVVDLLSNKMQMLMSFNNTQNIHNLLHFC--KIAAINASFTFLV 287
            A CIV L SL++T KST ++     +  L+       +    H C        AS  +L+
Sbjct: 1364 ACCIVSLISLIRTGKSTAIEAGMFALDRLLDIKRFVEVAE-EHDCVNLFYGYVASENYLI 1422

Query: 286  SSSKISALT 260
            S + IS LT
Sbjct: 1423 SEAAISCLT 1431


>At5g02310.1 68418.m00154 eceriferum3 protein, putative similar to
            eceriferum3 GI:1669655 from [Arabidopsis thaliana]
          Length = 2006

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 24/91 (26%), Positives = 42/91 (46%)
 Frame = -2

Query: 535  TYK*TIFLMVVQVVFIKDTYYPCQYATCIVLLCSLVKTEKSTVVDLLSNKMQMLMSFNNT 356
            T K ++  M +   F K++  P     CI  L   +KT K T++ +L   ++++ S    
Sbjct: 1550 TLKYSLISMEIGTRFAKNSMLPVY---CIDSLYEELKTSKGTILSVL---LRVVQSSRTK 1603

Query: 355  QNIHNLLHFCKIAAINASFTFLVSSSKISAL 263
              IH    F  +  +  S  + VSSS  S++
Sbjct: 1604 NTIHVRQRFVGMKHLAESICYGVSSSSSSSI 1634


>At1g68640.1 68414.m07843 bZIP family transcription factor
           (PERIANTHIA) identical to transcription factor
           PERIANTHIA GB:AAD19660 GI:4378757 from [Arabidopsis
           thaliana]
          Length = 452

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/64 (28%), Positives = 35/64 (54%)
 Frame = +1

Query: 79  LSSTCSIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKN* 258
           L++ CS   + SN+ + + +      +N EA+++SR+ +K    Q+E   I L +  +  
Sbjct: 150 LATNCS---DQSNVKSSDQRTLRRLAQNREAARKSRLRKKAYVQQLENSRIRLAQLEE-- 204

Query: 259 ELKQ 270
           ELK+
Sbjct: 205 ELKR 208


>At1g54570.1 68414.m06223 esterase/lipase/thioesterase family
           protein contains Interpro entry IPR000379
          Length = 704

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -2

Query: 436 SLVKTEKSTVVDLLSNKMQMLMSFNNTQNIHNLLHFCKIAAINASFTFLVSSSKISALTL 257
           S +   ++ V+ L S K  ML S    + +H LL  C +     +   L+    IS LT+
Sbjct: 320 SRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLLKNCSVRCFKDNGHTLLLEDSISLLTV 379


>At5g13640.1 68418.m01582 lecithin:cholesterol acyltransferase
           family protein / LACT family protein similar to
           SP|P40345 Phospholipid:diacylglycerol acyltransferase
           (EC 2.3.1.158) (PDAT) {Saccharomyces cerevisiae};
           contains Pfam profile PF02450: Lecithin:cholesterol
           acyltransferase (phosphatidylcholine-sterol
           acyltransferase)
          Length = 671

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 94  CMWMIVCCLVSWGVGLFFW-SQPVAIPQ 14
           C W I C  V+W   LF + + P + PQ
Sbjct: 54  CCWFIGCVCVTWWFLLFLYNAMPASFPQ 81


>At4g34000.2 68417.m04825 ABA-responsive element-binding protein /
           abscisic acid responsive elements-binding factor (ABRE)
           / ABA-responsive elements-binding factor (ABF3)
           identical to abscisic acid responsive elements-binding
           factor (ABF3) GI:6739280 from [Arabidopsis thaliana];
           identical to cDNA abscisic acid responsive
           elements-binding factor (ABRE) mRNA, complete cds
           GI:6739279
          Length = 454

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 157 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
           KN E++ RSR  ++   +++E     L+E N+  + KQ+
Sbjct: 381 KNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQV 419


>At4g34000.1 68417.m04824 ABA-responsive element-binding protein /
           abscisic acid responsive elements-binding factor (ABRE)
           / ABA-responsive elements-binding factor (ABF3)
           identical to abscisic acid responsive elements-binding
           factor (ABF3) GI:6739280 from [Arabidopsis thaliana];
           identical to cDNA abscisic acid responsive
           elements-binding factor (ABRE) mRNA, complete cds
           GI:6739279
          Length = 449

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 157 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKN*ELKQI 273
           KN E++ RSR  ++   +++E     L+E N+  + KQ+
Sbjct: 381 KNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQV 419


>At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 zinc
           finger, C3HC4 type (RING finger)
          Length = 236

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +1

Query: 103 ENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAID 234
           E + N+  ++    E  D NNE+S+  ++ +K+K+    +L  D
Sbjct: 27  EMTKNLKKRDLDAVEDEDSNNESSRLEKLEKKIKKETARKLETD 70


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,018,923
Number of Sequences: 28952
Number of extensions: 267740
Number of successful extensions: 719
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)