Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1187
(623 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 4.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 4.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 4.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 4.2
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 5.6
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 5.6
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 5.6
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 5.6
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 21 7.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.8
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 9.8
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 389 SSLKNHYFHCFITYSVGRK 445
SS +FHC+ GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 553 VRGHCQAGSLTRAVHLSRITQCP 621
+R H +GS+TR++ L+ CP
Sbjct: 118 IRIH-HSGSITRSIRLTITASCP 139
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 553 VRGHCQAGSLTRAVHLSRITQCP 621
+R H +GS+TR++ L+ CP
Sbjct: 118 IRIH-HSGSITRSIRLTITASCP 139
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 553 VRGHCQAGSLTRAVHLSRITQCP 621
+R H +GS+TR++ L+ CP
Sbjct: 57 IRIH-HSGSITRSIRLTITASCP 78
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 368 VGDRFARSSLKNHYFHCFI 424
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 236 PLSLSTTSETTAKGTGL 286
PLSL ETT GT L
Sbjct: 447 PLSLKNKVETTHSGTSL 463
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 368 VGDRFARSSLKNHYFHCFI 424
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 396 SDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSP 286
+D R SP TP+ + Y +E+ + S F D+P
Sbjct: 21 NDKRIYLSPR--TPIKNVYKNNIETKNQLSPFNIDTP 55
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.4 bits (43), Expect = 7.4
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2
Query: 445 LPPNRVSNETMKVVVFQRRSRETISHLCYTSHVSLQCQTRVKLNRVFFP 299
+PP V K +V R+ E C ++ +QC + + FFP
Sbjct: 97 MPPEEVV--IGKEIVAVCRNEEYTGDDCQKTYQYVQCHYKQNPEKFFFP 143
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 363 ATPLMSPYNARLESSSTGSSFP 298
A + SP + SSTGSS P
Sbjct: 347 AKQMASPEPPKSSESSTGSSIP 368
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 294 QRGKKTLLSLTLVWHCKE 347
+ G KTLLS T +W ++
Sbjct: 231 KNGMKTLLSETDIWEVEQ 248
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 520 RFRHSPLCTLGTKHGAPADIIDGAPLPPNRVSN 422
RF+ P C L K ++I A L + + N
Sbjct: 73 RFKSLPRCQLSNKRDRSRELIKAAILANDFMKN 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,718
Number of Sequences: 438
Number of extensions: 3669
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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