Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1184
(342 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SG50 Cluster: NADH dehydrogenase subunit 5; n=1; Chir... 43 0.002
UniRef50_P18932 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 42 0.002
UniRef50_Q2QC27 Cluster: NADH dehydrogenase subunit 5; n=66; Pol... 41 0.005
UniRef50_P34854 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 40 0.011
UniRef50_Q85JU6 Cluster: NADH dehydrogenase 5; n=1; Pelecinus po... 36 0.18
UniRef50_Q8SG46 Cluster: NADH dehydrogenase subunit 5; n=1; Gast... 36 0.23
UniRef50_Q6SKZ8 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 34 0.54
UniRef50_Q36428 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 34 0.72
UniRef50_Q25809 Cluster: Rps3 protein; n=2; Plasmodium|Rep: Rps3... 32 2.2
UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 32 2.2
UniRef50_Q6TUZ9 Cluster: 11L; n=1; Yaba monkey tumor virus|Rep: ... 32 2.9
UniRef50_Q85KH3 Cluster: NADH dehydrogenase 5; n=1; Schlettereri... 32 2.9
UniRef50_Q6UKF7 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 32 2.9
UniRef50_A3QU30 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 32 2.9
UniRef50_Q0QJ92 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 3.8
UniRef50_Q6SKY5 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 5.0
UniRef50_A7E1Q1 Cluster: NADH dehydrogenase subunit 5; n=1; Ache... 31 5.0
UniRef50_Q4Y0U3 Cluster: Ubiquitin-conjugating enzyme, putative;... 31 6.7
UniRef50_P21421 Cluster: DNA-directed RNA polymerase subunit bet... 31 6.7
UniRef50_Q6TUM6 Cluster: 148R; n=2; Yatapoxvirus|Rep: 148R - Yab... 30 8.8
UniRef50_Q0P8H6 Cluster: Putative sugar transferase; n=6; Campyl... 30 8.8
>UniRef50_Q8SG50 Cluster: NADH dehydrogenase subunit 5; n=1;
Chironomus sp. LRC-2002|Rep: NADH dehydrogenase subunit
5 - Chironomus sp. LRC-2002
Length = 208
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -1
Query: 237 PNLSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
P+LST G +N LFKN+D GW E + + IF I N S Q NN K
Sbjct: 133 PSLSTIGVVKHPINLSFKLFKNLDQGWFEFFGIQQIFKIFMNVSSIIQFIQFNNLK 188
>UniRef50_P18932 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=143; Neoptera|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Drosophila melanogaster (Fruit fly)
Length = 572
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -1
Query: 237 PNLSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
P +STYG + LN+ Q++ K+ D GW E + G+ ++ L YS + N+ K
Sbjct: 498 PYISTYGMIFYPLNYGQLVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLK 553
>UniRef50_Q2QC27 Cluster: NADH dehydrogenase subunit 5; n=66;
Polyphaga|Rep: NADH dehydrogenase subunit 5 -
Metriorrhynchus sp. UPOL 000170
Length = 340
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -1
Query: 231 LSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
LST+G Y +L+F ID GW E Y ++ LKN S F +NN K
Sbjct: 272 LSTFGVIYYFLSFGDKFNSYIDQGWSEYYGSMNLYYSLKNTSFFMQKIFLNNVK 325
>UniRef50_P34854 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1332; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Anopheles gambiae (African malaria mosquito)
Length = 580
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -1
Query: 237 PNLSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
P +ST G L +K+ D GW E + G+ ++ LKNYS++ +Q N+ K
Sbjct: 504 PVISTLGVINYPLKLGLYSYKSFDQGWSEFFGGQMVYFQLKNYSLYLQEFQSNSLK 559
>UniRef50_Q85JU6 Cluster: NADH dehydrogenase 5; n=1; Pelecinus
polyturator|Rep: NADH dehydrogenase 5 - Pelecinus
polyturator
Length = 196
Score = 35.9 bits (79), Expect = 0.18
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1
Query: 207 IYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQIN 79
I++ ++LFK ID GW EI+ GI ++ NY F IYQ+N
Sbjct: 137 IFIILSKMLFKYIDKGWNEIFGKSGILKLM-NY--FNLIYQMN 176
>UniRef50_Q8SG46 Cluster: NADH dehydrogenase subunit 5; n=1;
Gasterophilus sp. LRC-2002|Rep: NADH dehydrogenase
subunit 5 - Gasterophilus sp. LRC-2002
Length = 166
Score = 35.5 bits (78), Expect = 0.23
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -1
Query: 237 PNLSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNF 73
P +STYG L + +FK D GW E + G+ +F L + YQ N F
Sbjct: 89 PYISTYGIISGPLIMGESIFKGFDHGWSEYFGGQQLFKKLIENLKLISCYQDNKF 143
>UniRef50_Q6SKZ8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Hutchinsoniella macracantha|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Hutchinsoniella macracantha
Length = 578
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 162 GWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
GW E+Y +G +NIL S YQ+NN K
Sbjct: 530 GWAELYGPQGTYNILTKTSANMQTYQMNNLK 560
>UniRef50_Q36428 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=552; Mandibulata|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Locusta migratoria (Migratory locust)
Length = 572
Score = 33.9 bits (74), Expect = 0.72
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -1
Query: 237 PNLSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
P LST +Y+ L+F K+ D GW E+ G+G+++ + +NFK
Sbjct: 498 PFLSTNYVSYLPLSFGYYSLKSFDSGWGELLGGQGLYSFFVYLINYIQSLYDSNFK 553
>UniRef50_Q25809 Cluster: Rps3 protein; n=2; Plasmodium|Rep: Rps3
protein - Plasmodium falciparum
Length = 214
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = -1
Query: 201 LNFRQILFKN-IDIGWREIYRGKG-IFNILKNYSVFYNIYQINNFK 70
L FR +++KN ++ + I + K + NIL Y ++YN+Y+I N+K
Sbjct: 8 LIFRGLIYKNYLNNFYINISKNKYYLINILLTYFIYYNMYRICNYK 53
>UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Nymphon gracile|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Nymphon gracile
Length = 558
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Frame = -1
Query: 216 FNYIYLNFRQILFKNIDIGWREIY--RGKGIFNILK------NYSVFYNIYQINNF 73
F+Y+ N N++ GW E Y RG G+F + NY F Y +N F
Sbjct: 494 FSYVIFNLSNFYILNLEQGWGEFYGPRGMGLFFLSMGKFMNFNYFKFMEFYHLNFF 549
>UniRef50_Q6TUZ9 Cluster: 11L; n=1; Yaba monkey tumor virus|Rep: 11L
- Yaba monkey tumor virus (YMTV)
Length = 637
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = -1
Query: 210 YIYLN--FRQI-LFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINN 76
Y ++N R+I + KN+ IG YR IFNILKNY++ + I+N
Sbjct: 527 YKFINECIREINVIKNVKIG----YRNYSIFNILKNYNINLAVDYIDN 570
>UniRef50_Q85KH3 Cluster: NADH dehydrogenase 5; n=1; Schlettererius
cinctipes|Rep: NADH dehydrogenase 5 - Schlettererius
cinctipes
Length = 202
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 234 NLSTYGFNYI-YLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNF 73
N+ + I L F + +K I+ GW E+Y G+G+ + ++ ++ NF
Sbjct: 131 NMDNFSIEVINILKFGNLYYKIIEKGWNELYSGQGVIYLYIYLMKYFMKFKYMNF 185
>UniRef50_Q6UKF7 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=2; Protostomia|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Phoronis psammophila
Length = 577
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 210 YIYLNFRQILFKNIDIGWREIYRGKGIFNILKNY 109
Y+ L+ IL K D GW EI+ G+G F++ K +
Sbjct: 514 YLGLSSSFILMKVSDQGWSEIFGGQGAFSLSKTF 547
>UniRef50_A3QU30 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Epiperipatus biolleyi|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Epiperipatus biolleyi
Length = 559
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 237 PNLSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
P +S+ F +++ + F+N+DI W E+ +G F +L S Q N+ K
Sbjct: 488 PKISSQIFLNFMMSWSKFSFENVDISWVEMLGLQGTFKVLVYSSKILQSIQKNSIK 543
>UniRef50_Q0QJ92 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Xenos vesparum|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Xenos vesparum
Length = 540
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -1
Query: 222 YGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
Y N + NF +K I+ GW E+ G GI+ ++ FY+ Q N +
Sbjct: 480 YYMNIFFYNF----YKFIEKGWAEVLIGPGIYKNYGVFTFFYSYSQANKLQ 526
>UniRef50_Q6SKY5 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Speleonectes tulumensis|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Speleonectes tulumensis
Length = 564
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 231 LSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQIN 79
L++ G Y N LFK D+GW E Y G+G++ N F Q N
Sbjct: 494 LTSSGMIYFPFNLGGGLFKVSDLGWFEKYGGQGLYMGFYNGFGFIRYIQEN 544
>UniRef50_A7E1Q1 Cluster: NADH dehydrogenase subunit 5; n=1; Achelia
bituberculata|Rep: NADH dehydrogenase subunit 5 -
Achelia bituberculata
Length = 568
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 183 LFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINN 76
L K D+GW E Y G+G+F L N S N +++ N
Sbjct: 514 LMKMFDMGWGEYYGGQGLFKTL-NLSSNLNNFKLYN 548
>UniRef50_Q4Y0U3 Cluster: Ubiquitin-conjugating enzyme, putative;
n=2; Plasmodium (Vinckeia)|Rep: Ubiquitin-conjugating
enzyme, putative - Plasmodium chabaudi
Length = 226
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -1
Query: 210 YIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 70
Y+Y + FKNI I +++Y GK ILK+Y FYN + N +K
Sbjct: 89 YLYNEIHGVYFKNIKITTKKVY-GKIYKTILKSY--FYNFVK-NKWK 131
>UniRef50_P21421 Cluster: DNA-directed RNA polymerase subunit beta;
n=5; Plasmodium|Rep: DNA-directed RNA polymerase subunit
beta - Plasmodium falciparum
Length = 1024
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 222 YGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILK-NYSVFYNI 91
YG N +YLN R I+ N++ + Y IFN K NY+ +NI
Sbjct: 822 YGLNSLYLNTRYIISNNLNKNYYNNY--NHIFNYYKYNYNNNFNI 864
>UniRef50_Q6TUM6 Cluster: 148R; n=2; Yatapoxvirus|Rep: 148R - Yaba
monkey tumor virus (YMTV)
Length = 483
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -1
Query: 234 NLSTYGFNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYN 94
N++ Y F Y L FKNI + R GK I +K Y YN
Sbjct: 372 NVNAYNFVYGNLKIHYSYFKNIILKKRLTVYGKVIVKKVKKYKCMYN 418
>UniRef50_Q0P8H6 Cluster: Putative sugar transferase; n=6;
Campylobacter jejuni|Rep: Putative sugar transferase -
Campylobacter jejuni
Length = 776
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 201 LNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQIN 79
LN + ILF NID +I+ + K Y ++ NIY IN
Sbjct: 528 LNEKSILFNNIDDLQDKIFETNKCKYLPKIYGIYKNIYDIN 568
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,168,551
Number of Sequences: 1657284
Number of extensions: 2086874
Number of successful extensions: 5387
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5375
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -