Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1184
         (342 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   8.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   8.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -3

Query: 277 DII*EVF*FNMIYT*FIYLWFQLYLFKF 194
           D +  ++ FN+ Y  F + W  + +  F
Sbjct: 311 DTLVVIYTFNLFYLCFCFYWLLVMVAMF 338


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 5/20 (25%), Positives = 13/20 (65%)
 Frame = -3

Query: 67  LFI*IYFMVYNSIYFFFYLI 8
           +F+  YF+   ++Y+ +Y +
Sbjct: 144 VFVFCYFIYLFTVYYIYYSV 163


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -3

Query: 277 DII*EVF*FNMIYT*FIYLWFQLYLFKF 194
           D +  ++ FN+ Y  F + W  + +  F
Sbjct: 267 DTLVVIYTFNLFYLCFCFYWLLVMVAMF 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,143
Number of Sequences: 336
Number of extensions: 557
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)