Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1183
         (771 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8EXE6 Cluster: Aminotransferase; n=4; Leptospira|Rep: ...    33   5.9  
UniRef50_A0Q821 Cluster: 10 TMS drug/metabolite exporter protein...    33   7.9  

>UniRef50_Q8EXE6 Cluster: Aminotransferase; n=4; Leptospira|Rep:
           Aminotransferase - Leptospira interrogans
          Length = 383

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = +2

Query: 512 NNQIVFRFRFNKKSGTTKLRIVFGNYERFFFFKTTFMYLQPFDCHSPFIAFYLDRVNFIN 691
           N+++   +R   KSG  +  I  GN+  + +F++T   LQ    HS     Y +  ++++
Sbjct: 247 NDEVYLPYRAELKSGADRYEISTGNFIDWVYFQSTLEMLQKIGFHSVMERIY-ELADYLS 305

Query: 692 QLMK 703
           + MK
Sbjct: 306 EGMK 309


>UniRef50_A0Q821 Cluster: 10 TMS drug/metabolite exporter protein;
           n=11; Francisella tularensis|Rep: 10 TMS drug/metabolite
           exporter protein - Francisella tularensis subsp.
           novicida (strain U112)
          Length = 294

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +2

Query: 521 IVFRFRFNKKSGTTKLRIVFGNYERF-FFFKTTFMYLQPFDCHSPFIAFYLDRVNFINQL 697
           ++ R +FN K    K+  +FG+ E   F+F+T  +Y       +   A  +  + FI  L
Sbjct: 52  LILRAKFNNKLYLLKVGAIFGSLEGLSFYFQTHGLYTVSSSQSAFLTALSVVMIPFIGSL 111

Query: 698 MK*ISTNLRYYGTL*SCTS 754
            K     L  YG + SC S
Sbjct: 112 FK--VDRLTIYGIVASCVS 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,814,670
Number of Sequences: 1657284
Number of extensions: 10987188
Number of successful extensions: 19603
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19594
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)