Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1182
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.                    30   7.3  
BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9 superfa...    30   7.3  
BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9 superfa...    30   7.3  
AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9 superfa...    30   7.3  

>U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.
          Length = 663

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 194 FFAFCVNNYRFRYFIQTYFVSDGF--IQFLFYISHFYYYNLRFSLPSNHVSHFNY 352
           +F  C  +Y +++     F++ GF  + FL Y  H+++  L+ +  ++ + +F Y
Sbjct: 578 YFHLCAEDYHWQW---RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGY 629


>BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 194 FFAFCVNNYRFRYFIQTYFVSDGF--IQFLFYISHFYYYNLRFSLPSNHVSHFNY 352
           +F  C  +Y +++     F++ GF  + FL Y  H+++  L+ +  ++ + +F Y
Sbjct: 578 YFHLCAEDYHWQW---RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGY 629


>BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 194 FFAFCVNNYRFRYFIQTYFVSDGF--IQFLFYISHFYYYNLRFSLPSNHVSHFNY 352
           +F  C  +Y +++     F++ GF  + FL Y  H+++  L+ +  ++ + +F Y
Sbjct: 578 YFHLCAEDYHWQW---RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGY 629


>AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 194 FFAFCVNNYRFRYFIQTYFVSDGF--IQFLFYISHFYYYNLRFSLPSNHVSHFNY 352
           +F  C  +Y +++     F++ GF  + FL Y  H+++  L+ +  ++ + +F Y
Sbjct: 578 YFHLCAEDYHWQW---RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGY 629


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,829,355
Number of Sequences: 237096
Number of extensions: 1371827
Number of successful extensions: 2208
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)