Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1180
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   1.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   7.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 111 NKCTYTGTNKTDLN 70
           NKC YT  NK+ LN
Sbjct: 262 NKCDYTCVNKSMLN 275


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 111 NKCTYTGTNKTDLN 70
           NKC YT  NK+ LN
Sbjct: 20  NKCDYTCVNKSMLN 33


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 39  KDKTFSKS*IYLSRFCSSPCMYIYYK*HSRFIQHLRFSYR*YTEHINGAKSIKKYLVENI 218
           KD  +      LS   +S  M + +      +  LR     +TE I+   ++KKY V+ I
Sbjct: 119 KDAVWRNLRTKLSPVFTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYSVDII 178

Query: 219 SS 224
           S+
Sbjct: 179 ST 180


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 100 IHGDEQNRLKYIQLL 56
           IH D QNR K  +LL
Sbjct: 438 IHEDSQNRAKLSELL 452


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 302 SFICCIFYLFIY 337
           SF C +F++++Y
Sbjct: 14  SFCCILFFIYLY 25


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 463 HRSQNYSLYFYFSNFKMLSTIAL 395
           H+S  +   FY +++ +LS  +L
Sbjct: 51  HKSDYFYFSFYITSYTLLSVYSL 73


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 82  NRLKYIQLLLKVLSF 38
           NR K+I+ + KVL F
Sbjct: 461 NRWKFIEFIRKVLEF 475


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 129 SENVIYNKCTYTGTNKTDLNIF 64
           ++N++Y+K   T   KT  NIF
Sbjct: 82  AKNLLYSKQIVTILKKTKSNIF 103


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 463 HRSQNYSLYFYFSNFKMLSTIAL 395
           H+S  +   FY +++ +LS  +L
Sbjct: 51  HKSDYFYFSFYITSYTLLSVYSL 73


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 454 QNYSLYFYFSNFKMLSTIALPIG 386
           +N  +    ++ K LSTIAL +G
Sbjct: 23  KNEDVQLRLNSIKKLSTIALALG 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,679
Number of Sequences: 336
Number of extensions: 2384
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)