Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1177
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9) 72 6e-13
SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 6e-13
SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8) 72 6e-13
SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9) 72 6e-13
SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5) 72 6e-13
SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 6e-13
SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7) 63 2e-10
SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5) 63 2e-10
SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_42346| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_36138| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_15035| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_25175| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_49084| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_34898| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 32 0.61
SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5) 31 1.1
SB_3203| Best HMM Match : FGF (HMM E-Value=0.013) 31 1.4
SB_45983| Best HMM Match : HLH (HMM E-Value=1.3) 30 1.8
SB_53052| Best HMM Match : U79_P34 (HMM E-Value=2.7) 30 2.4
SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_29336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_52000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_3204| Best HMM Match : FGF (HMM E-Value=0.17) 29 4.3
SB_29775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_9945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_47653| Best HMM Match : zf-CCHC (HMM E-Value=0.0017) 28 9.9
SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRS-GVNLRNSNE 429
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE KS R G+ L+ +
Sbjct: 723 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELKSARQRRLGLGLKGGGK 781
>SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 148
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 60 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 112
>SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 6 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 58
>SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8)
Length = 148
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 60 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 112
>SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 147
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 59 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 111
>SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5)
Length = 206
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 118 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 170
>SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 17 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 69
>SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 256 SGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 384
SGCL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 34 SGCLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 76
>SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7)
Length = 187
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = -3
Query: 365 VLFNFPSRYLFAIGLAVIFSLRWSLPPA*GCTLKQPD 255
VLF FPSRYLFAIGL IFS RWSLPP GC KQPD
Sbjct: 89 VLFIFPSRYLFAIGLVPIFSFRWSLPPILGCIPKQPD 125
>SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 156
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = -3
Query: 365 VLFNFPSRYLFAIGLAVIFSLRWSLPPA*GCTLKQPD 255
VLF FPSRYLFAIGL IFS RWSLPP GC KQPD
Sbjct: 58 VLFIFPSRYLFAIGLVPIFSFRWSLPPILGCIPKQPD 94
>SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 44
>SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 44
>SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 426
GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 2 GGKLHLKLNIGKRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 44
>SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 384
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_42346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 384
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_36138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 384
GGKLHL+LN+ RPIANKYREGK+K TLK+ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKKRVK 34
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 348 GKVEKNFEERVQEYVKPFRGKP 413
GK++ ++RV++YVKP +GKP
Sbjct: 23 GKMKSTLKKRVKKYVKPLKGKP 44
>SB_15035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 384
GGKLHL+LN+ RPIANKYREGK+K TLK+ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKKRVK 34
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 348 GKVEKNFEERVQEYVKPFRGK 410
GK++ ++RV++YVKP +GK
Sbjct: 23 GKMKSTLKKRVKKYVKPLKGK 43
>SB_25175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 384
GGKLHL+LN+ RPIANKYREGK+K TL++ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLEKRVK 34
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 348 GKVEKNFEERVQEYVKPFRGK 410
GK++ E+RV++YVKP +GK
Sbjct: 23 GKMKSTLEKRVKKYVKPLKGK 43
>SB_49084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTL 369
GGKLHL+LN+ RPIANKYREG++K TL
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGQMKSTL 29
>SB_34898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +1
Query: 286 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 384
GGKLHL+LN+ RPIANKYREGK ++ ++ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKDEKHFEKRVK 34
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 348 GKVEKNFEERVQEYVKPFRGKPAKLE*TNGEIH 446
GK EK+FE+RV++YVK +GK L IH
Sbjct: 23 GKDEKHFEKRVKKYVKTLKGKRMGLAMRRARIH 55
>SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 338 LFAIGLAVIFSLRWSLPPA*GCTLKQPD 255
+ I + ++ + RWSLPP GC KQPD
Sbjct: 23 IIIIIIILLHTRRWSLPPILGCIPKQPD 50
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 307 ALDGVYHPLRAALSSNPT 254
ALDGVYHP AA +NPT
Sbjct: 58 ALDGVYHPFWAAFPNNPT 75
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 307 ALDGVYHPLRAALSSNPT 254
ALDGVYHP AA +NPT
Sbjct: 344 ALDGVYHPFWAAFPNNPT 361
>SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 139
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3
Query: 302 RWSLPPA*GCTLKQPD 255
RWSLPP GC KQPD
Sbjct: 62 RWSLPPILGCIPKQPD 77
>SB_3203| Best HMM Match : FGF (HMM E-Value=0.013)
Length = 423
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 253 RSGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRSGVNLRNSN 426
R G + V+P GK+++RLN + R GK+ L R K NR G N
Sbjct: 47 RHGKMYVRPNRHGKMYIRLNRHGKMYIRLNRHGKMYIRLNRHGKMYIRLNRHGKMYVRLN 106
Query: 427 ERTERFIVFSR-AYVYVRSDVDGTFVSCVVLRRHG 528
+ ++ +R +Y+R + G + L RHG
Sbjct: 107 RHGKMYVRPNRHGKMYIRLNRHGKMY--IRLNRHG 139
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 247 LLRSGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRSGVNLRN 420
L R G + V+P GK+++R N + R GK+ L R K NR G
Sbjct: 35 LNRHGKMYVRPNRHGKMYVRPNRHGKMYIRLNRHGKMYIRLNRHGKMYIRLNRHGKMYIR 94
Query: 421 SNERTERFIVFSR-AYVYVRSDVDGTFVSCVVLRRHG 528
N + ++ +R +YVR + G + L RHG
Sbjct: 95 LNRHGKMYVRLNRHGKMYVRPNRHGKMY--IRLNRHG 129
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 247 LLRSGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRSGVNLRN 420
L R G + V+P GK+++RLN + R GK+ R K NR G
Sbjct: 105 LNRHGKMYVRPNRHGKMYIRLNRHGKMYIRLNRHGKMYVRPNRHGKMYVRPNRHGKMYIR 164
Query: 421 SNERTERFIVFSR-AYVYVRSDVDGTFVSCVVLRRHG 528
N + +I +R +Y+R + G + L RHG
Sbjct: 165 LNRHGKMYIRLNRHCKMYIRLNRHGKMY--IRLNRHG 199
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 247 LLRSGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRSGVNLRN 420
L R G + V+P GK+++RLN + R GK+ L R K NR G
Sbjct: 248 LNRHGKMYVRPNRHGKMYIRLNRHGKMYIRLDRNGKMYIRLNRHGKMYIRLNRHGKMYIR 307
Query: 421 SNERTERFIVFSR-AYVYVRSDVDG 492
N + +I +R +Y+R + G
Sbjct: 308 LNRHGKMYIRLNRHGKMYIRLNRHG 332
Score = 28.7 bits (61), Expect = 5.6
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +1
Query: 247 LLRSGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRSGVNLRN 420
L R G + ++ GK+++RLN + R GK+ L R K +R+G
Sbjct: 228 LKRHGQMYIRLNRHGKMYIRLNRHGKMYVRPNRHGKMYIRLNRHGKMYIRLDRNGKMYIR 287
Query: 421 SNERTERFIVFSR-AYVYVRSDVDGTFVSCVVLRRHG 528
N + +I +R +Y+R + G + L RHG
Sbjct: 288 LNRHGKMYIRLNRHGKMYIRLNRHGKMY--IRLNRHG 322
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 289 GKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRSGVNLRNSNERTERFIVFSR- 459
GK+++RLN + R GK+ L R K NR G N + +I +R
Sbjct: 9 GKMYIRLNRHGKMYIRLNRHGKMYIRLNRHGKMYVRPNRHGKMYVRPNRHGKMYIRLNRH 68
Query: 460 AYVYVRSDVDGTFVSCVVLRRHG 528
+Y+R + G + L RHG
Sbjct: 69 GKMYIRLNRHGKMY--IRLNRHG 89
>SB_45983| Best HMM Match : HLH (HMM E-Value=1.3)
Length = 68
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 304 LDGVYHPLRAALSSNPT 254
LDGVYHP AA +NPT
Sbjct: 2 LDGVYHPFWAAFPNNPT 18
>SB_53052| Best HMM Match : U79_P34 (HMM E-Value=2.7)
Length = 1130
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 285 RLGLH--SQATRPKERPSRRDPPSLRAWHPLRENG 187
RLG+H S AT + PSRR PPS+ H +R+ G
Sbjct: 713 RLGVHKHSVATHVEADPSRRRPPSVHRCH-IRKGG 746
>SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 307 ALDGVYHPLRAALSSNPT 254
ALDG YHP AA +NPT
Sbjct: 58 ALDGFYHPFWAAFPNNPT 75
>SB_29336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 565 EVHVFSGR*TFTYRADGERRTKRTFRQH 482
EV++ R TF RADGERRT+ +H
Sbjct: 1017 EVYIAVNRKTFRTRADGERRTRGGRARH 1044
>SB_52000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +3
Query: 354 VEKNFEERVQEYVKPFRGK 410
++ +FE+RV++YVKP +GK
Sbjct: 1 MKSHFEKRVKKYVKPLKGK 19
>SB_3204| Best HMM Match : FGF (HMM E-Value=0.17)
Length = 249
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Frame = +1
Query: 247 LLRSGCLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKS--T*NRSGVNLRN 420
L R G + V+P GK++ RLN + R GK+ R K NR G
Sbjct: 149 LNRHGKMYVRPNRHGKMYFRLNRHGKMYVRLNRHGKMYVRPNRHGKMYIRLNRHGKMYIG 208
Query: 421 SNERTERFIVFSR-AYVYVRSDVDGTFVSCVVLRRHG 528
N + +I +R +Y+R + G + L RHG
Sbjct: 209 LNRHGKMYIRLNRHGKMYIRLNRHGKMY--IRLDRHG 243
>SB_29775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 300 MEFTTRLGLH--SQATRPKERPSRRDPPSLRAWH 205
+ F RLG+H S T + PSRR PPS+ H
Sbjct: 237 VRFGLRLGVHKHSVVTHVEADPSRRRPPSVHRCH 270
>SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -2
Query: 285 RLGLHSQ--ATRPKERPSRRDPPSL 217
RLG+H Q AT + PSRR PPS+
Sbjct: 440 RLGVHKQNVATHVEADPSRRRPPSV 464
>SB_9945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 366 FEERVQEYVKPFRGK 410
FE+RV++YVKP +GK
Sbjct: 5 FEKRVKKYVKPLKGK 19
>SB_47653| Best HMM Match : zf-CCHC (HMM E-Value=0.0017)
Length = 759
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 662 RIVPIHAFGRYH*TNHARVEKFLKKIFSYASGPTKSTS 775
R P+H F H H E KK FS+ T TS
Sbjct: 595 RCTPLHPFSPLHFNQHTTQETPHKKFFSFQRCSTHGTS 632
>SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -2
Query: 300 MEFTTRLGLHSQATRPKERPS-----RRDPPSLRAWHPLREN 190
MEFTT GLHSQ T P R PP + P E+
Sbjct: 1 MEFTTHFGLHSQTTSNSCSPGDPLVLERPPPRWSSNSPYSES 42
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,089,744
Number of Sequences: 59808
Number of extensions: 483509
Number of successful extensions: 1416
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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