Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1177
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.7  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   3.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.6  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   6.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   6.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   6.1  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.1  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 214 GLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 107
           G  P      ++ R W GV+   KR  P   S ++D
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD 441


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 238 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 131
           +P  S++ G++      P +   WTG V  RK+  P
Sbjct: 241 NPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKP 276


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 270 SQATRPKERPSRRDPPSLRAWHP 202
           SQ  R ++R  RRDPP  R   P
Sbjct: 219 SQRNRSQQRSPRRDPPINRQHTP 241


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 229 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 107
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 229 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 107
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 229 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 107
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 81  PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 698 NDTVRMRGSERYAVRTCSKRIKLVRSPARS 609
           N T+R R S     R+CS++ +  R+  R+
Sbjct: 273 NSTIRSRSSSLSRSRSCSRQAETPRADDRA 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,043
Number of Sequences: 2352
Number of extensions: 14733
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)