Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1177
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051473-1|BAB21777.2| 1175|Homo sapiens KIAA1686 protein protein.     31   4.7  
AF293639-1|AAG33381.1|  715|Homo sapiens dioxin receptor repress...    30   8.2  
AB033060-1|BAA86548.1|  727|Homo sapiens KIAA1234 protein protein.     30   8.2  

>AB051473-1|BAB21777.2| 1175|Homo sapiens KIAA1686 protein protein.
          Length = 1175

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -3

Query: 260 PDLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAE 138
           PD RSVP   TL+   P +L GKT    T L    R ++AE
Sbjct: 593 PDRRSVPAGLTLQSVSPQSLQGKTPEELTLLLIKLRRQQAE 633


>AF293639-1|AAG33381.1|  715|Homo sapiens dioxin receptor repressor
           protein.
          Length = 715

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -2

Query: 279 GLHSQ-ATRPKERPSRRDPPSLR 214
           G HS+   RP+ +PS+ DPPSLR
Sbjct: 423 GKHSEDGARPRLQPSKNDPPSLR 445


>AB033060-1|BAA86548.1|  727|Homo sapiens KIAA1234 protein protein.
          Length = 727

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -2

Query: 279 GLHSQ-ATRPKERPSRRDPPSLR 214
           G HS+   RP+ +PS+ DPPSLR
Sbjct: 435 GKHSEDGARPRLQPSKNDPPSLR 457


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,154,427
Number of Sequences: 237096
Number of extensions: 2136104
Number of successful extensions: 6037
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6036
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)