Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1177
(787 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p pro... 31 2.4
AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p pro... 31 2.4
AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding ... 31 2.4
AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-P... 31 2.4
AY094891-1|AAM11244.1| 336|Drosophila melanogaster RE61595p pro... 29 5.4
AY060907-1|AAL28455.1| 336|Drosophila melanogaster GM05421p pro... 29 5.4
AE014298-1787|AAF48180.2| 336|Drosophila melanogaster CG1463-PA... 29 5.4
AY058309-1|AAL13538.1| 544|Drosophila melanogaster GH07238p pro... 29 9.5
AE014298-2566|AAF48726.1| 544|Drosophila melanogaster CG5529-PA... 29 9.5
AE014297-1345|AAN13522.1| 150|Drosophila melanogaster CG31389-P... 29 9.5
>BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p
protein.
Length = 563
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 461 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 357
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 378 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 409
>AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p
protein.
Length = 1075
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 461 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 357
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615
>AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding
protein 11 protein.
Length = 1075
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 461 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 357
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615
>AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-PA
protein.
Length = 1075
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 461 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 357
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615
>AY094891-1|AAM11244.1| 336|Drosophila melanogaster RE61595p
protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 527 PCRRRTTHETNVPSTSERT*TYAREKTMNLSVRSFEFRR 411
PC+R T + N+P T R A+++ +NL ++ F R
Sbjct: 92 PCKRFTHDQRNLPVTQHRMRMAAKKRNINLRLQLENFSR 130
>AY060907-1|AAL28455.1| 336|Drosophila melanogaster GM05421p
protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 527 PCRRRTTHETNVPSTSERT*TYAREKTMNLSVRSFEFRR 411
PC+R T + N+P T R A+++ +NL ++ F R
Sbjct: 92 PCKRFTHDQRNLPVTQHRMRMAAKKRNINLRLQLENFSR 130
>AE014298-1787|AAF48180.2| 336|Drosophila melanogaster CG1463-PA
protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 527 PCRRRTTHETNVPSTSERT*TYAREKTMNLSVRSFEFRR 411
PC+R T + N+P T R A+++ +NL ++ F R
Sbjct: 92 PCKRFTHDQRNLPVTQHRMRMAAKKRNINLRLQLENFSR 130
>AY058309-1|AAL13538.1| 544|Drosophila melanogaster GH07238p
protein.
Length = 544
Score = 28.7 bits (61), Expect = 9.5
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -1
Query: 331 LSVSRSYLALDGVYHPLRAALSS-NPT*GASLSPRPSVATGLAPSTGKRPRSRRTWTGVV 155
LS S S +L Y AA S+ NP ++P PSV G PS +P + +
Sbjct: 449 LSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASASP 508
Query: 154 ATRKRNLPNTTSPVID 107
R P+T SP ++
Sbjct: 509 PPRP---PSTPSPTLN 521
>AE014298-2566|AAF48726.1| 544|Drosophila melanogaster CG5529-PA
protein.
Length = 544
Score = 28.7 bits (61), Expect = 9.5
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -1
Query: 331 LSVSRSYLALDGVYHPLRAALSS-NPT*GASLSPRPSVATGLAPSTGKRPRSRRTWTGVV 155
LS S S +L Y AA S+ NP ++P PSV G PS +P + +
Sbjct: 449 LSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASASP 508
Query: 154 ATRKRNLPNTTSPVID 107
R P+T SP ++
Sbjct: 509 PPRP---PSTPSPTLN 521
>AE014297-1345|AAN13522.1| 150|Drosophila melanogaster CG31389-PA
protein.
Length = 150
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 604 KSTTNGSRCITKREVHVFSGR*TFTYRADGERRTKRTFRQH 482
K+ NG+R + V VF+G F YR G+ + +R H
Sbjct: 6 KNGMNGTRGAHEWRVMVFAGAQKFAYRMQGDEQQQRQQENH 46
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,749,374
Number of Sequences: 53049
Number of extensions: 684944
Number of successful extensions: 1893
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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