Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1176
(731 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q201W5 Cluster: Putative RAD23-like B; n=2; Neoptera|Re... 105 8e-22
UniRef50_P54725 Cluster: UV excision repair protein RAD23 homolo... 102 1e-20
UniRef50_Q9XZE0 Cluster: DHR23; n=5; Sophophora|Rep: DHR23 - Dro... 97 5e-19
UniRef50_UPI000156129F Cluster: PREDICTED: similar to MHR23A; n=... 96 7e-19
UniRef50_Q4T7D6 Cluster: Chromosome undetermined SCAF8128, whole... 95 1e-18
UniRef50_P54727 Cluster: UV excision repair protein RAD23 homolo... 95 1e-18
UniRef50_Q6AXI3 Cluster: Zgc:92001; n=10; Coelomata|Rep: Zgc:920... 94 3e-18
UniRef50_UPI00015A6B69 Cluster: hypothetical protein LOC445284; ... 93 6e-18
UniRef50_A7SRL4 Cluster: Predicted protein; n=1; Nematostella ve... 87 6e-16
UniRef50_O74803 Cluster: UV excision repair protein rhp23; n=1; ... 81 4e-14
UniRef50_UPI0000E46F9B Cluster: PREDICTED: similar to Chain A, S... 75 2e-12
UniRef50_Q9GZJ7 Cluster: RAD23 homolog; n=1; Hydractinia echinat... 73 1e-11
UniRef50_Q17JC6 Cluster: Uv excision repair protein rad23; n=1; ... 71 2e-11
UniRef50_Q1JTK9 Cluster: DNA repair protein rad23 homolog b, put... 69 1e-10
UniRef50_Q6C8W3 Cluster: Similar to sp|O74803 Schizosaccharomyce... 69 2e-10
UniRef50_Q84L30 Cluster: Putative DNA repair protein RAD23-4; n=... 68 2e-10
UniRef50_Q5CXV9 Cluster: RAD23p, UB+UBA domains protein; n=2; Cr... 68 3e-10
UniRef50_O03991 Cluster: RAD23 protein, isoform II; n=1; Daucus ... 67 4e-10
UniRef50_Q84L31 Cluster: Putative DNA repair protein RAD23-3; n=... 66 6e-10
UniRef50_A5AQB0 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q7PRQ2 Cluster: ENSANGP00000017457; n=1; Anopheles gamb... 65 1e-09
UniRef50_A4S3S2 Cluster: Predicted protein; n=2; Ostreococcus|Re... 65 2e-09
UniRef50_Q2UTN9 Cluster: Nucleotide excision repair factor NEF2;... 64 3e-09
UniRef50_A4RK10 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A7TSH9 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q23451 Cluster: Putative uncharacterized protein rad-23... 62 1e-08
UniRef50_Q3ECA5 Cluster: Uncharacterized protein At1g79650.3; n=... 60 5e-08
UniRef50_Q4UI64 Cluster: DNA repair protein (RAD23 homologue), p... 60 5e-08
UniRef50_Q54LV1 Cluster: RepC-binding protein A; n=2; Dictyostel... 60 7e-08
UniRef50_A5K7E2 Cluster: DNA repair protein RAD23, putative; n=1... 58 2e-07
UniRef50_Q40742 Cluster: Probable DNA repair protein RAD23; n=5;... 56 7e-07
UniRef50_UPI00004986BD Cluster: RAD23 protein; n=1; Entamoeba hi... 55 2e-06
UniRef50_Q22RQ9 Cluster: UBA/TS-N domain containing protein; n=1... 55 2e-06
UniRef50_Q8IJS8 Cluster: DNA repair protein RAD23, putative; n=1... 55 2e-06
UniRef50_Q4YRP1 Cluster: DNA repair protein RAD23, putative; n=3... 54 3e-06
UniRef50_Q5KN72 Cluster: Uv excision repair protein rhp23, putat... 54 3e-06
UniRef50_P32628 Cluster: UV excision repair protein RAD23; n=4; ... 54 4e-06
UniRef50_Q9VCD5 Cluster: CG10694-PA; n=1; Drosophila melanogaste... 52 1e-05
UniRef50_A2DH54 Cluster: UBA/TS-N domain containing protein; n=1... 52 2e-05
UniRef50_A5DUA6 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_A2FM19 Cluster: UBA/TS-N domain containing protein; n=1... 50 4e-05
UniRef50_Q298K5 Cluster: GA10501-PA; n=1; Drosophila pseudoobscu... 50 6e-05
UniRef50_Q753F6 Cluster: AFR358Wp; n=1; Eremothecium gossypii|Re... 49 1e-04
UniRef50_Q6BXC6 Cluster: Debaryomyces hansenii chromosome B of s... 49 1e-04
UniRef50_Q4D7G6 Cluster: UV excision repair RAD23-like protein, ... 48 2e-04
UniRef50_Q4Q6V9 Cluster: UV excision repair RAD23-like protein; ... 44 0.004
UniRef50_A0CBZ8 Cluster: Chromosome undetermined scaffold_166, w... 44 0.005
UniRef50_A2DSP6 Cluster: UBA/TS-N domain containing protein; n=1... 43 0.007
UniRef50_A0DWV1 Cluster: Chromosome undetermined scaffold_67, wh... 41 0.027
UniRef50_A2ETT4 Cluster: UBA/TS-N domain containing protein; n=1... 40 0.063
UniRef50_Q4P3T5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.063
UniRef50_A4HHH1 Cluster: Putative uncharacterized protein; n=3; ... 40 0.083
UniRef50_A0L6W4 Cluster: Putative uncharacterized protein precur... 38 0.33
UniRef50_A2E9G1 Cluster: UBA/TS-N domain containing protein; n=1... 38 0.33
UniRef50_UPI0000499807 Cluster: UV excision repair protein RAD23... 37 0.59
UniRef50_A2DY94 Cluster: Ubiquitin family protein; n=1; Trichomo... 36 0.77
UniRef50_A2EJT6 Cluster: UBA/TS-N domain containing protein; n=1... 36 1.0
UniRef50_A7FT71 Cluster: Sensor histidine kinase; n=4; Clostridi... 35 2.4
UniRef50_A4RTH7 Cluster: Predicted protein; n=2; Ostreococcus|Re... 34 3.1
UniRef50_Q22E93 Cluster: Ubiquitin family protein; n=1; Tetrahym... 34 3.1
UniRef50_UPI00006CBFBD Cluster: Ubiquitin carboxyl-terminal hydr... 34 4.1
UniRef50_P76079 Cluster: Phenylacetic acid degradation protein p... 34 4.1
UniRef50_UPI000023D2D8 Cluster: hypothetical protein FG07461.1; ... 33 5.5
UniRef50_Q56J89 Cluster: RAD23B-like protein; n=1; Adineta ricci... 33 5.5
UniRef50_A7RSU6 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.5
UniRef50_Q0FHX2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A6RBV6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q73AM1 Cluster: NADH dehydrogenase subunit 3, putative;... 33 9.5
UniRef50_Q4DHZ4 Cluster: Putative uncharacterized protein; n=2; ... 33 9.5
>UniRef50_Q201W5 Cluster: Putative RAD23-like B; n=2; Neoptera|Rep:
Putative RAD23-like B - Acyrthosiphon pisum (Pea aphid)
Length = 347
Score = 105 bits (253), Expect = 8e-22
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +2
Query: 80 DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
DPLAFLR+QP FQQMR V+QQNP LLN+VLQQIGQTNPALLQ+IS +QEAFVRMLNEP
Sbjct: 221 DPLAFLRNQPTFQQMRTVVQQNPELLNSVLQQIGQTNPALLQMISNNQEAFVRMLNEP 278
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
+ VS QDKEAI+RLKALGFPEH V+QAYFACEKNEN+AAN LL+Q DD
Sbjct: 299 VPVSTQDKEAIDRLKALGFPEHQVVQAYFACEKNENMAANLLLTQEPDD 347
>UniRef50_P54725 Cluster: UV excision repair protein RAD23 homolog
A; n=21; Eutheria|Rep: UV excision repair protein RAD23
homolog A - Homo sapiens (Human)
Length = 363
Score = 102 bits (244), Expect = 1e-20
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +2
Query: 50 EQEAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEA 229
EQ A E++ E+PL FLRDQPQFQ MR VIQQNP LL A+LQQ+GQ NP LLQ IS+HQE
Sbjct: 220 EQPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQ 279
Query: 230 FVRMLNEP 253
F++MLNEP
Sbjct: 280 FIQMLNEP 287
Score = 96.7 bits (230), Expect = 5e-19
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +1
Query: 328 NVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKNENLAANFLLSQNFDD
Sbjct: 312 NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDD 362
>UniRef50_Q9XZE0 Cluster: DHR23; n=5; Sophophora|Rep: DHR23 -
Drosophila melanogaster (Fruit fly)
Length = 414
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFV 235
E S+ DP FLR QPQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+
Sbjct: 231 ERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFL 290
Query: 236 RMLNEP 253
MLN+P
Sbjct: 291 NMLNQP 296
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +1
Query: 268 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 447
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403
Query: 448 ANFLLSQNFDD 480
ANFLLS +F+D
Sbjct: 404 ANFLLSSSFED 414
>UniRef50_UPI000156129F Cluster: PREDICTED: similar to MHR23A; n=2;
Eutheria|Rep: PREDICTED: similar to MHR23A - Equus
caballus
Length = 146
Score = 96.3 bits (229), Expect = 7e-19
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +1
Query: 328 NVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKNENLAANFLLSQNFDD
Sbjct: 95 NYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLSQNFDD 145
>UniRef50_Q4T7D6 Cluster: Chromosome undetermined SCAF8128, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF8128, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 320
Score = 95.5 bits (227), Expect = 1e-18
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +2
Query: 77 EDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
E+PLAFLR+QPQF MR IQQNPNLL+A+LQQ+GQ NP LLQ I+QHQE F++MLNEP
Sbjct: 193 ENPLAFLRNQPQFLHMRQAIQQNPNLLSALLQQLGQENPQLLQQINQHQERFIQMLNEP 251
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 322 SQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
S N IQV+ Q+KEAIER KALGFPE +VIQAYFACEKNENLAANFLL+Q +D
Sbjct: 267 SVNYIQVTPQEKEAIERFKALGFPEALVIQAYFACEKNENLAANFLLNQGLED 319
>UniRef50_P54727 Cluster: UV excision repair protein RAD23 homolog
B; n=43; Euteleostomi|Rep: UV excision repair protein
RAD23 homolog B - Homo sapiens (Human)
Length = 409
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = +2
Query: 68 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 247
SS PL FLR+QPQFQQMR +IQQNP+LL A+LQQIG+ NP LLQ ISQHQE F++MLN
Sbjct: 270 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLN 329
Query: 248 EP 253
EP
Sbjct: 330 EP 331
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +1
Query: 319 GSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
G N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKNENLAANFLL QNFD+
Sbjct: 355 GHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDE 408
>UniRef50_Q6AXI3 Cluster: Zgc:92001; n=10; Coelomata|Rep: Zgc:92001
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 362
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFV 235
+ + + E+PL FLR QPQFQ MR VIQQNP+LL A+LQQ+GQ NP LLQ ISQHQE F+
Sbjct: 218 DTQPTEGENPLEFLRSQPQFQSMRQVIQQNPSLLPALLQQLGQENPELLQQISQHQELFI 277
Query: 236 RMLNEP 253
+MLN P
Sbjct: 278 QMLNAP 283
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
IQV+ Q+KEAIERLKALGF E +V+QAYFACEKNENLAANFLL+QNF+D
Sbjct: 313 IQVTQQEKEAIERLKALGFSEALVVQAYFACEKNENLAANFLLNQNFED 361
>UniRef50_UPI00015A6B69 Cluster: hypothetical protein LOC445284;
n=1; Danio rerio|Rep: hypothetical protein LOC445284 -
Danio rerio
Length = 385
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +2
Query: 77 EDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
E+PL FLR QPQFQ MR VIQQNP+LL A+LQQ+GQ NP LLQ ISQHQE F++MLN P
Sbjct: 248 ENPLEFLRSQPQFQSMRQVIQQNPSLLPALLQQLGQENPELLQQISQHQELFIQMLNAP 306
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
IQV+ Q+KEAIERLKALGF E +V+QAYFACEKNENLAANFLL+QNF+D
Sbjct: 336 IQVTQQEKEAIERLKALGFSEALVVQAYFACEKNENLAANFLLNQNFED 384
>UniRef50_A7SRL4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 364
Score = 86.6 bits (205), Expect = 6e-16
Identities = 44/74 (59%), Positives = 53/74 (71%)
Frame = +1
Query: 259 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNE 438
P+A G ++V P G + IQ++ +KEAIERLK LGFPE +VIQAYFACEKNE
Sbjct: 291 PAAGGEGGQQSVPGEGAPPPGV-SYIQITPVEKEAIERLKQLGFPEPLVIQAYFACEKNE 349
Query: 439 NLAANFLLSQNFDD 480
NLAANFLL+Q DD
Sbjct: 350 NLAANFLLNQGSDD 363
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = +2
Query: 50 EQEAEESSDE--DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ 223
++ EE++ E L FLR QPQF MR ++QQNP +L +LQ +GQ+NP+LLQ+IS HQ
Sbjct: 216 DEGEEETAAEGVSSLEFLRTQPQFITMRRMVQQNPGVLPQLLQSMGQSNPSLLQLISSHQ 275
Query: 224 EAFVRMLNEP 253
+ F+RMLNEP
Sbjct: 276 DEFIRMLNEP 285
>UniRef50_O74803 Cluster: UV excision repair protein rhp23; n=1;
Schizosaccharomyces pombe|Rep: UV excision repair
protein rhp23 - Schizosaccharomyces pombe (Fission
yeast)
Length = 368
Score = 80.6 bits (190), Expect = 4e-14
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = +2
Query: 47 HEQEAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 226
++++ + +DPL FLR PQFQQ+R ++QQNP +L +LQQIGQ +PAL Q I+Q+ E
Sbjct: 234 NQEQPSNTVGDDPLGFLRSIPQFQQLRQIVQQNPQMLETILQQIGQGDPALAQAITQNPE 293
Query: 227 AFVRMLNE 250
AF+++L E
Sbjct: 294 AFLQLLAE 301
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 250 TRNPSA-AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFAC 426
T+NP A + ++ + P G Q IQ++ ++ E+I+RL LGF ++VIQAY AC
Sbjct: 289 TQNPEAFLQLLAEGAEGESALPSGGIQ--IQITQEESESIDRLCQLGFDRNIVIQAYLAC 346
Query: 427 EKNENLAANFLLSQNFD 477
+KNE LAAN+L +
Sbjct: 347 DKNEELAANYLFEHGHE 363
>UniRef50_UPI0000E46F9B Cluster: PREDICTED: similar to Chain A,
Structure Of The Dna Repair Protein Hhr23a isoform 2;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Chain A, Structure Of The Dna Repair Protein
Hhr23a isoform 2 - Strongylocentrotus purpuratus
Length = 405
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQN 471
I++ ++++AIERLK LGFPE +VIQAYFAC+KNENLAANFLL +N
Sbjct: 360 IELMPEERDAIERLKGLGFPEELVIQAYFACDKNENLAANFLLHEN 405
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 50 EQEAEESSDEDP-LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 226
+ ++ + P L FL PQFQQ+R I +P +L+ LQ +GQ+NP LLQ+ISQ QE
Sbjct: 221 QSSSQPGGESSPSLEFLDQLPQFQQLREAISSDPAMLSQFLQSLGQSNPQLLQIISQRQE 280
Query: 227 AFVRMLNE 250
F+ ++N+
Sbjct: 281 EFIALINQ 288
>UniRef50_Q9GZJ7 Cluster: RAD23 homolog; n=1; Hydractinia
echinata|Rep: RAD23 homolog - Hydractinia echinata
(Snail fur) (Hermit crab hydroid)
Length = 101
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNE 250
L+FLR+ PQFQ MR +Q++P L +LQ+IGQ+NP LLQ+ISQ+QEAF+ +LNE
Sbjct: 6 LSFLRNLPQFQLMRDQVQEHPESLPQLLQEIGQSNPQLLQLISQNQEAFIALLNE 60
>UniRef50_Q17JC6 Cluster: Uv excision repair protein rad23; n=1;
Aedes aegypti|Rep: Uv excision repair protein rad23 -
Aedes aegypti (Yellowfever mosquito)
Length = 347
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +1
Query: 331 VIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
V ++ D +AI+RLKALGFPEH+VIQAY ACE+NE AA+FL+SQ DD
Sbjct: 296 VDSLTQSDMDAIDRLKALGFPEHLVIQAYIACERNEYQAADFLVSQTLDD 345
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/61 (40%), Positives = 46/61 (75%)
Frame = +2
Query: 68 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 247
++ E LAFLR+ P F +M+ ++Q++P+LL +LQ+I +NP L+++IS++Q F+ ++N
Sbjct: 213 TTQESRLAFLREHPTFLEMKRLLQEDPSLLPHLLQKIQSSNPDLMRIISENQVEFLSLIN 272
Query: 248 E 250
E
Sbjct: 273 E 273
>UniRef50_Q1JTK9 Cluster: DNA repair protein rad23 homolog b,
putative; n=1; Toxoplasma gondii RH|Rep: DNA repair
protein rad23 homolog b, putative - Toxoplasma gondii RH
Length = 380
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 EQEAE-ESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 226
E +AE + DE+PL LR P F Q+R ++Q NP +L VLQ IG +NP LL++I+Q+Q+
Sbjct: 238 EGDAEGDEDDENPLGALRHHPAFNQIRQMVQANPAMLPQVLQLIGNSNPQLLELITQNQD 297
Query: 227 AFVRML 244
AF+ ML
Sbjct: 298 AFLEML 303
Score = 60.1 bits (139), Expect = 5e-08
Identities = 23/50 (46%), Positives = 40/50 (80%)
Frame = +1
Query: 331 VIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
+IQ++A++ EA++RL++LGF H ++AY AC++NE +AAN+L +N +D
Sbjct: 325 IIQMTAEEMEALQRLESLGFSRHQAVEAYLACDRNEEMAANYLF-ENLND 373
>UniRef50_Q6C8W3 Cluster: Similar to sp|O74803 Schizosaccharomyces
pombe UV excision repair protein rhp23; n=1; Yarrowia
lipolytica|Rep: Similar to sp|O74803 Schizosaccharomyces
pombe UV excision repair protein rhp23 - Yarrowia
lipolytica (Candida lipolytica)
Length = 359
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
IQV+ ++ +AIERL ALGF ++VIQAYFAC+KNE + AN+LL +DD
Sbjct: 309 IQVTPEESDAIERLAALGFERNLVIQAYFACDKNEEVTANYLLEHGYDD 357
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 53 QEAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAF 232
Q A + + L FLRD PQF +MR ++QQ P+LL ++QQ+ +NP L +I+Q+ EAF
Sbjct: 228 QGASVAPNTSALDFLRDNPQFIEMRRMVQQQPHLLEPLIQQLAASNPQLAALITQNSEAF 287
Query: 233 VRMLNE 250
+ +L E
Sbjct: 288 LHLLGE 293
>UniRef50_Q84L30 Cluster: Putative DNA repair protein RAD23-4; n=13;
Magnoliophyta|Rep: Putative DNA repair protein RAD23-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 378
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/65 (43%), Positives = 46/65 (70%)
Frame = +2
Query: 59 AEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVR 238
A+ + L FLR+ QFQ +RA++Q NP +L +LQ++G+ NP L+++I +HQ F+R
Sbjct: 244 ADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLR 303
Query: 239 MLNEP 253
++NEP
Sbjct: 304 LINEP 308
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +1
Query: 274 VASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAAN 453
V +ENV ++Q + + V+ +++EAIERL+ +GF MV++ +FAC KNE LAAN
Sbjct: 309 VEGEENV--MEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAAN 366
Query: 454 FLLS--QNFDD 480
+LL F+D
Sbjct: 367 YLLDHMHEFED 377
>UniRef50_Q5CXV9 Cluster: RAD23p, UB+UBA domains protein; n=2;
Cryptosporidium|Rep: RAD23p, UB+UBA domains protein -
Cryptosporidium parvum Iowa II
Length = 362
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +1
Query: 313 QLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFD 477
Q Q IQ++ Q+ E++ERL+ALGFP + VI+AY CEKNE LAAN+LL + D
Sbjct: 301 QFPMQTTIQLTPQEAESVERLQALGFPRNAVIEAYLICEKNEELAANYLLENSAD 355
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = +2
Query: 68 SSDEDP--LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRM 241
SS++ P L LR P FQQ+R+V+QQ+P +L +L +IGQ+NP +LQ+I+++QE F+RM
Sbjct: 228 SSEQLPGNLESLRTNPLFQQLRSVVQQDPRILPELLVRIGQSNPEILQLITENQEEFIRM 287
Query: 242 L 244
+
Sbjct: 288 M 288
>UniRef50_O03991 Cluster: RAD23 protein, isoform II; n=1; Daucus
carota|Rep: RAD23 protein, isoform II - Daucus carota
(Carrot)
Length = 379
Score = 67.3 bits (157), Expect = 4e-10
Identities = 26/56 (46%), Positives = 43/56 (76%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
L FLR+ PQFQ +R+++Q+NP +L +L ++G+ NP LL+ I +H E F++++NEP
Sbjct: 254 LEFLRNNPQFQTLRSMVQRNPQILQPMLLELGKQNPQLLRQIQEHHEEFLQLINEP 309
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +1
Query: 277 ASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANF 456
AS+ ++ D QP+ I V+A D+EAIERL+A+GF +VI+A+ AC++NE LA N+
Sbjct: 312 ASEGDMFD--QPEQDVPQEITVTAADQEAIERLEAMGFDRGLVIEAFLACDRNEELAVNY 369
Query: 457 LLSQ--NFDD 480
LL +F+D
Sbjct: 370 LLENAGDFED 379
>UniRef50_Q84L31 Cluster: Putative DNA repair protein RAD23-3; n=12;
Magnoliophyta|Rep: Putative DNA repair protein RAD23-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 419
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
L FLR+ QFQ +RA++Q NP +L +LQ++G+ NP L+++I HQ F+R++NEP
Sbjct: 290 LDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEP 345
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1
Query: 295 ADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLL 462
A + QPQ IQV+ +++EAIERL+A+GF +V++ +FAC KNE LAAN+LL
Sbjct: 361 AGMPQPQ-----AIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLL 411
>UniRef50_A5AQB0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 349
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/56 (46%), Positives = 42/56 (75%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
L FLR+ QFQ +RA++Q NP +L +LQ++G+ NP LL++I +H F++++NEP
Sbjct: 288 LEFLRNNHQFQALRAMVQANPQILQPMLQELGKQNPHLLRLIQEHHAEFLQLINEP 343
>UniRef50_Q7PRQ2 Cluster: ENSANGP00000017457; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017457 - Anopheles gambiae
str. PEST
Length = 300
Score = 65.3 bits (152), Expect = 1e-09
Identities = 25/64 (39%), Positives = 48/64 (75%)
Frame = +2
Query: 59 AEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVR 238
A +S D +PLAFLRD P F+ MR +++ +P++L +++++ +NP LL +I+++Q+ F+
Sbjct: 237 AAQSGDANPLAFLRDNPVFEDMRRILRDDPSMLPYLMRRMQASNPDLLNIIAEYQDEFLA 296
Query: 239 MLNE 250
++NE
Sbjct: 297 LINE 300
>UniRef50_A4S3S2 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 361
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +2
Query: 50 EQEAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEA 229
+ + S D L FLRD PQFQ +RA++Q P++L +L ++ + NP L +I+ +QE
Sbjct: 214 DMAGDRSGDGQMLDFLRDNPQFQAIRAMVQGQPHILQPMLAELQRQNPQLYHLINNNQEE 273
Query: 230 FVRMLNEP 253
F+ +LNEP
Sbjct: 274 FLALLNEP 281
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 298 DIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS 465
++Q G+Q I++S +++E I+RL LGFP + ++AY AC+KNE LAAN+LL+
Sbjct: 301 ELQGDDDGAQ--IELSQEERETIDRLAGLGFPLEICVEAYLACDKNEQLAANYLLN 354
>UniRef50_Q2UTN9 Cluster: Nucleotide excision repair factor NEF2;
n=13; Pezizomycotina|Rep: Nucleotide excision repair
factor NEF2 - Aspergillus oryzae
Length = 403
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPG 256
L FLR+ P FQQ+R ++QQ P +L +LQQ+ NP + Q+I Q++E F+++L+E G
Sbjct: 285 LDFLRNNPHFQQLRQLVQQQPQMLEPILQQVAAGNPQIAQLIGQNEEQFLQLLSEEG 341
Score = 62.9 bits (146), Expect = 8e-09
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
I V+ ++++AIERL LGF MVI+AYFAC+KNE LAANFL +N DD
Sbjct: 352 IHVTEEERDAIERLCRLGFSRDMVIEAYFACDKNEELAANFLF-ENTDD 399
>UniRef50_A4RK10 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 401
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = +1
Query: 295 ADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNF 474
AD P I V+ ++++AIERL LGF IQAYFAC+KNE LAANFL Q
Sbjct: 336 ADEDAPLPPGAQAIAVTEEERDAIERLCRLGFGREQAIQAYFACDKNEELAANFLFDQPD 395
Query: 475 DD 480
DD
Sbjct: 396 DD 397
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNE 250
L FLR+ QFQQ+R V+QQ P +L +LQQ+G NP L Q+I+Q+ E F+ +L E
Sbjct: 280 LDFLRNNTQFQQLRQVVQQQPQMLEPILQQLGAGNPQLAQLIAQNPEQFLALLGE 334
>UniRef50_A7TSH9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 404
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +1
Query: 325 QNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFD 477
Q+++Q+S +D++AI RL LGF ++VIQ YFAC+KNE +AAN L S+ D
Sbjct: 354 QHIVQLSEEDEQAISRLCELGFERNLVIQVYFACDKNEEIAANILFSEYAD 404
>UniRef50_Q23451 Cluster: Putative uncharacterized protein rad-23;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rad-23 - Caenorhabditis elegans
Length = 372
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +2
Query: 65 ESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRML 244
+ D L L + PQ ++RA+IQQNP +L AVLQQ+ NP L+Q I +Q+AF+ +L
Sbjct: 238 DEDGNDDLNMLANMPQLAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQNNQQAFMDLL 297
Query: 245 N 247
N
Sbjct: 298 N 298
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +1
Query: 325 QNVIQVSAQDKEAIERLKAL--GFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
++VI +S ++ AIER+KA+ PE +V++AYFAC+KNE A NF+ S N D+
Sbjct: 319 RHVIHLSPEEAAAIERIKAIVVNAPEAVVVEAYFACDKNEEAAINFIFS-NLDE 371
>UniRef50_Q3ECA5 Cluster: Uncharacterized protein At1g79650.3; n=2;
Arabidopsis thaliana|Rep: Uncharacterized protein
At1g79650.3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 351
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = +1
Query: 307 QPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFD 477
QP+ + I V+ ++EAI+RL+A+GF +VI+A+ AC++NE LAAN+LL + D
Sbjct: 292 QPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGD 348
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/28 (42%), Positives = 23/28 (82%)
Frame = +2
Query: 170 QQIGQTNPALLQVISQHQEAFVRMLNEP 253
Q++G+ NP LL++I ++Q F++++NEP
Sbjct: 252 QELGKQNPQLLRLIQENQAEFLQLVNEP 279
>UniRef50_Q4UI64 Cluster: DNA repair protein (RAD23 homologue),
putative; n=3; Piroplasmida|Rep: DNA repair protein
(RAD23 homologue), putative - Theileria annulata
Length = 328
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFV 235
E + + +D L L+ P F+Q+ ++ +PNLL +L+ +GQTNP LLQ I Q Q+ FV
Sbjct: 193 EHGDPAGDDVLQMLQSHPMFEQLIQAVRSDPNLLQQMLENLGQTNPELLQAIIQRQDEFV 252
Query: 236 RMLN 247
+L+
Sbjct: 253 ELLS 256
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +1
Query: 295 ADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNF 474
AD + N+I ++ + E+I+RL+ LGF VI+AY AC+KNE LAAN+LL +NF
Sbjct: 265 ADQYSTTENNPNIITLTPVEMESIQRLEGLGFSRPAVIEAYLACDKNEELAANYLL-ENF 323
Query: 475 DD 480
+D
Sbjct: 324 ND 325
>UniRef50_Q54LV1 Cluster: RepC-binding protein A; n=2; Dictyostelium
discoideum|Rep: RepC-binding protein A - Dictyostelium
discoideum AX4
Length = 342
Score = 59.7 bits (138), Expect = 7e-08
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +2
Query: 50 EQEAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEA 229
E E S ++P LR+ P F +R I +NP+++ +LQQ+ QTNPAL++ I ++
Sbjct: 214 EMEGGGGSGDNPFEALRNHPHFNLLREAISKNPSIIPGILQQLAQTNPALVRQIQENPNE 273
Query: 230 FVRMLNEPG 256
F+R+ G
Sbjct: 274 FIRLFQGDG 282
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 325 QNVIQVSAQDKEAIERLKAL-GFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
Q +QV+ ++ EAI+RL+AL G + VI+AYFAC+KNE L A++L D+
Sbjct: 290 QFTLQVTQEESEAIQRLQALTGMDKSTVIEAYFACDKNEELTASYLFETADDE 342
>UniRef50_A5K7E2 Cluster: DNA repair protein RAD23, putative; n=1;
Plasmodium vivax|Rep: DNA repair protein RAD23, putative
- Plasmodium vivax
Length = 406
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Frame = +1
Query: 250 TRNPSAAGVA-SDENVADIQQPQLGSQNV--IQVSAQDKEAIERLKALGFPEHMVIQAYF 420
T N AG A +D+ +I P + N+ ++ + E+I++L++LGFP+H+ ++A+
Sbjct: 324 TENDLMAGDAFADQGNQNITDPNNENFNIPITPLNENEMESIKKLESLGFPKHLALEAFI 383
Query: 421 ACEKNENLAANFLLSQNFDD 480
AC+KNE +AAN+L +N +D
Sbjct: 384 ACDKNEEMAANYLF-ENMND 402
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 98 RDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPGT 259
R P F +R V NP + +L+ IG+T+P+ L+ I ++Q F+R + GT
Sbjct: 264 RSSPFFNILRDVALSNPQRIPEILEMIGRTDPSFLEFIRENQGEFIRAIQNYGT 317
>UniRef50_Q40742 Cluster: Probable DNA repair protein RAD23; n=5;
Oryza sativa|Rep: Probable DNA repair protein RAD23 -
Oryza sativa subsp. japonica (Rice)
Length = 392
Score = 56.4 bits (130), Expect = 7e-07
Identities = 21/53 (39%), Positives = 39/53 (73%)
Frame = +2
Query: 95 LRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
LR+ QF+ + +++Q NP +L +LQ++G+ NP +LQ+I ++Q F+ ++NEP
Sbjct: 265 LRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEP 317
Score = 56.0 bits (129), Expect = 9e-07
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 283 DENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLL 462
+EN+ D Q P+ Q I V+ ++ EAI RL+A+GF +V+ +FAC K+E LAAN+LL
Sbjct: 323 EENLLD-QFPEAMPQT-IAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLL 380
Query: 463 S--QNFDD 480
FDD
Sbjct: 381 DHMNEFDD 388
>UniRef50_UPI00004986BD Cluster: RAD23 protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RAD23 protein - Entamoeba
histolytica HM-1:IMSS
Length = 314
Score = 55.2 bits (127), Expect = 2e-06
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +1
Query: 139 TESQFVKCCVTADWSDKS--SFITSNQPTSRSLCQNVK*TRNPSAAGVASDENV-ADIQ- 306
T+ QF++ C +S + S P++ L +N +D V ++ Q
Sbjct: 197 TKDQFIELCREQPQIIESFIQHVESENPSAAQLIRNNPGMIYDIIKSQTNDNRVPSEPQH 256
Query: 307 -QPQLG-SQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFD 477
QPQ + + Q+S +D AI+RL LGF +QAY AC+KNE LAANFLL FD
Sbjct: 257 TQPQPNHAPSQPQLSPEDNAAIDRLCGLGFGRSQCLQAYIACDKNEQLAANFLL-DGFD 314
>UniRef50_Q22RQ9 Cluster: UBA/TS-N domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: UBA/TS-N domain
containing protein - Tetrahymena thermophila SB210
Length = 373
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +2
Query: 80 DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRML 244
+ LA L PQFQ + I+QNP LL V+QQ+ QTNP + +++ Q+ +AF+++L
Sbjct: 197 EQLAQLAQNPQFQHIAQAIRQNPALLQPVMQQLAQTNPDVARLLQQNPQAFLQLL 251
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +1
Query: 328 NVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFL 459
N IQV+ ++K I+ + ++GF ++ ++AY C+KN+ LA N+L
Sbjct: 266 NAIQVTPEEKADIDDIISMGFDKNDALEAYITCDKNKELAINYL 309
>UniRef50_Q8IJS8 Cluster: DNA repair protein RAD23, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair protein RAD23,
putative - Plasmodium falciparum (isolate 3D7)
Length = 389
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/69 (37%), Positives = 46/69 (66%)
Frame = +1
Query: 274 VASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAAN 453
V SD N +I P + ++ + E+I++L++LGFP+H+ ++A+ AC+KNE +AAN
Sbjct: 324 VLSDPNNENINIP------ITPLNENEMESIKKLESLGFPKHVALEAFIACDKNEEMAAN 377
Query: 454 FLLSQNFDD 480
+L +N +D
Sbjct: 378 YLF-ENMND 385
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 98 RDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPG 256
R+ F +R + NP L +LQ IG+T+P+ L+ I Q+Q F+ L G
Sbjct: 236 RNSTFFNAIRDMALSNPQRLPELLQMIGRTDPSFLEYIRQNQTEFLAALQNYG 288
>UniRef50_Q4YRP1 Cluster: DNA repair protein RAD23, putative; n=3;
Plasmodium (Vinckeia)|Rep: DNA repair protein RAD23,
putative - Plasmodium berghei
Length = 368
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 196 FITSNQPTSRSLCQNVK*TRNPSAAGVASDENVADIQQPQLGSQNV--IQVSAQDKEAIE 369
+I NQ + QN N S + + D + N+ ++ + E++
Sbjct: 269 YIRENQNEFLNALQNYDTDNNNSENDLIPNYEYTDETNQNNDNFNIPITSLNESEMESVR 328
Query: 370 RLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
+L++LGFP+H+ ++A+ AC+KNE +AAN+L +N +D
Sbjct: 329 KLESLGFPKHVALEAFIACDKNEEMAANYLF-ENMND 364
Score = 39.5 bits (88), Expect = 0.083
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 95 LRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPGT 259
LR+ P F +R NP + +L+ IG+++P+LL+ I ++Q F+ L T
Sbjct: 232 LRNSPFFNIIRDAALSNPQRIPEILEMIGRSDPSLLEYIRENQNEFLNALQNYDT 286
>UniRef50_Q5KN72 Cluster: Uv excision repair protein rhp23,
putative; n=2; Filobasidiella neoformans|Rep: Uv
excision repair protein rhp23, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 406
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
+ ++ ++ A+ERL+ALGF V+QAY C+KNE LAANFL +D
Sbjct: 357 VNLTQEEAAAVERLEALGFDRQTVLQAYMLCDKNEELAANFLFENMEED 405
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 110 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPG 256
Q +R ++QQNP ++ +LQQI +P L Q+I+Q+ EA +L G
Sbjct: 292 QLSAIRQMVQQNPAMIQPLLQQIATEHPELAQLIAQNPEALYELLGGGG 340
>UniRef50_P32628 Cluster: UV excision repair protein RAD23; n=4;
Saccharomycetales|Rep: UV excision repair protein RAD23
- Saccharomyces cerevisiae (Baker's yeast)
Length = 398
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +1
Query: 235 QNVK*TRNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQA 414
++++ T +AAG+ E Q + + +D +AI RL LGF +VIQ
Sbjct: 327 EDIEVTGEAAAAGLGQGEGEGSFQ---------VDYTPEDDQAISRLCELGFERDLVIQV 377
Query: 415 YFACEKNENLAANFLLSQNFD 477
YFAC+KNE AAN L S + D
Sbjct: 378 YFACDKNEEAAANILFSDHAD 398
>UniRef50_Q9VCD5 Cluster: CG10694-PA; n=1; Drosophila
melanogaster|Rep: CG10694-PA - Drosophila melanogaster
(Fruit fly)
Length = 290
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
I ++A++ A+ RL+ALGF M +QAY AC+K+E LAA L+ Q+ +D
Sbjct: 240 ITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEED 288
Score = 40.7 bits (91), Expect = 0.036
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +2
Query: 80 DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 247
D L L +MR +I QNP L++ ++ ++ +T+PA +V ++QE + M++
Sbjct: 170 DQLQQLMADLNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMIS 225
>UniRef50_A2DH54 Cluster: UBA/TS-N domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: UBA/TS-N domain containing
protein - Trichomonas vaginalis G3
Length = 231
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 322 SQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFL 459
S + Q+S +EAI+RL+A GF +H+VIQ Y+ACE NE A N L
Sbjct: 180 SAKLEQLSPDQREAIKRLEANGFEKHLVIQVYYACEFNEENALNIL 225
>UniRef50_A5DUA6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 359
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFL 459
I +S QD+ AI RL LGF ++VIQ Y AC+KNE +AA+ L
Sbjct: 314 IPISEQDENAINRLCELGFDRNLVIQVYLACDKNEEVAADIL 355
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 110 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVR 238
Q Q +RA +Q NP L+ +L+Q+ +NP + +IS+ E F+R
Sbjct: 232 QMQLLRAALQSNPELIQPLLEQLSASNPQIANMISEDPEGFIR 274
>UniRef50_A2FM19 Cluster: UBA/TS-N domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: UBA/TS-N domain containing
protein - Trichomonas vaginalis G3
Length = 321
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 298 DIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQN 471
D ++P + + + ++++AI+RL LGF H+VI Y AC+KNE L AN LL+ N
Sbjct: 263 DEEEPIPDQDPLSKFTPEEQDAIKRLCELGFDIHLVIHVYEACDKNEALTANCLLAMN 320
>UniRef50_Q298K5 Cluster: GA10501-PA; n=1; Drosophila
pseudoobscura|Rep: GA10501-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 313
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 313 QLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
Q S ++A + A++RL ALGF + +Q Y AC KNE LAA+ L Q+ +D
Sbjct: 257 QADSAQQTPLTAAEAAAVDRLTALGFQHDLAVQVYLACNKNEELAADVLFRQSEED 312
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 247
LA L P+F Q+R +I QNP+ L A+L Q+ +NP + + + H FV +LN
Sbjct: 190 LAPLMSDPRFAQLREMILQNPDQLEAILGQMSGSNPEVFEGLRNHHGEFVDLLN 243
>UniRef50_Q753F6 Cluster: AFR358Wp; n=1; Eremothecium gossypii|Rep:
AFR358Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 413
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 304 QQPQLGSQN-VIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
Q +QN ++ +S +D IERL LGF +VIQ Y AC+KNE + AN L + N+ D
Sbjct: 355 QDTAADAQNELLSLSEEDLTTIERLCELGFERDLVIQIYVACDKNEEVTANMLFT-NYTD 413
>UniRef50_Q6BXC6 Cluster: Debaryomyces hansenii chromosome B of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
B of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 373
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFL 459
I ++ QD+ AI RL LGF ++VIQ Y AC+KNE +AA+ L
Sbjct: 328 IALTEQDESAINRLCELGFDRNLVIQVYMACDKNEEVAADIL 369
Score = 39.9 bits (89), Expect = 0.063
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 95 LRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVR 238
L + Q + +R +Q NP L+ +L+Q+ +NP + +I Q E F+R
Sbjct: 246 LGEDNQMRLLRTALQTNPELIQPLLEQLAASNPQVAALIQQDPEGFIR 293
>UniRef50_Q4D7G6 Cluster: UV excision repair RAD23-like protein,
putative; n=2; Trypanosoma cruzi|Rep: UV excision repair
RAD23-like protein, putative - Trypanosoma cruzi
Length = 361
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +2
Query: 62 EESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRM 241
++ SD L PQF ++R+++Q NP L V+QQ+ +P ++ +I Q E F+R+
Sbjct: 226 QDDSDSALYNALMQIPQFGEIRSIVQANPESLPTVVQQLRIHHPEVIGLIQQDLEGFLRI 285
Query: 242 LNEPG 256
+ PG
Sbjct: 286 MGNPG 290
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALG---FPEHMVIQAYFACEKNENLAANFLLSQNFD 477
I + +++ AI+RL LG + E I+AY ACE++E AA+ L S F+
Sbjct: 311 IPLREEERVAIQRLVELGGGAWTEEDAIEAYRACEESEEAAAHLLFSNFFE 361
>UniRef50_Q4Q6V9 Cluster: UV excision repair RAD23-like protein;
n=3; Leishmania|Rep: UV excision repair RAD23-like
protein - Leishmania major
Length = 425
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +2
Query: 68 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 247
S++ + A L PQF ++R + QN + L V+QQI +PA+ + I + E F+ +++
Sbjct: 252 SAESEMRAALSRIPQFDEIRILYNQNTDTLPVVMQQIALRHPAVYEQIERDPEVFLSIMS 311
Query: 248 EPG 256
E G
Sbjct: 312 ESG 314
>UniRef50_A0CBZ8 Cluster: Chromosome undetermined scaffold_166,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_166,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 351
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Frame = +2
Query: 104 QP-QFQQMRAVIQQNPN----LLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPG 256
QP Q QQ+R + QQNP LL +LQQI QTNP L +SQ+ E ++ML G
Sbjct: 201 QPNQIQQLRQLYQQNPQAVLQLLPQLLQQIQQTNPELHAQVSQNPEMLLQMLMGAG 256
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 304 QQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQ 468
Q P GS IQ++ Q+ + IE + LGF + ++ Y AC+KN +A N+L +
Sbjct: 259 QGPPPGS---IQLTQQEFKDIETIMQLGFTKQDSLEGYIACDKNVEMAINYLFEK 310
>UniRef50_A2DSP6 Cluster: UBA/TS-N domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: UBA/TS-N domain containing
protein - Trichomonas vaginalis G3
Length = 250
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +1
Query: 337 QVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS 465
Q + +K+AIERLK+ GF ++ + AC+KNE LA + LL+
Sbjct: 207 QFTQAEKDAIERLKSNGFSFSQCVEMFVACDKNEELALSLLLT 249
>UniRef50_A0DWV1 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 331
Score = 41.1 bits (92), Expect = 0.027
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 104 QPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRML 244
Q QQ+R QNP + +L Q+ QTNP L Q I Q+ EA V+++
Sbjct: 182 QNALQQLREQFIQNPEAILQLLPQLQQTNPQLYQQIQQNPEALVQLI 228
Score = 33.1 bits (72), Expect = 7.2
Identities = 10/44 (22%), Positives = 28/44 (63%)
Frame = +1
Query: 337 QVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQ 468
+++ ++++ + +L +GF + ++ + AC+KN AA++L +
Sbjct: 242 EITQEEEQQLNQLIMMGFTKEDALEGFLACDKNVETAASYLFEK 285
>UniRef50_A2ETT4 Cluster: UBA/TS-N domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: UBA/TS-N domain containing
protein - Trichomonas vaginalis G3
Length = 250
Score = 39.9 bits (89), Expect = 0.063
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 337 QVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS 465
++S+ +KEA+ERL LGF IQ + C K+E A N L S
Sbjct: 206 KLSSSEKEALERLDTLGFDPTTTIQIFIVCGKDEEQARNCLSS 248
>UniRef50_Q4P3T5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 447
Score = 39.9 bits (89), Expect = 0.063
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 337 QVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS--QNFDD 480
++ D+ +++++ A+G PE I+ YF C KN +A + Q+FDD
Sbjct: 398 ELDEPDRASVQQIVAMGIPEAKAIECYFMCGKNVEMAVQYYFENPQDFDD 447
Score = 33.1 bits (72), Expect = 7.2
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +2
Query: 62 EESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRM 241
E+ + + L + Q++ ++QQNP L ++ I Q+NP L + ++ + + +
Sbjct: 321 EDDGSGEQVIDLGNPAMLAQLQQLVQQNPAALQPLVHAIAQSNPQLAEAMNHDPQGVLAL 380
Query: 242 L 244
L
Sbjct: 381 L 381
>UniRef50_A4HHH1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 401
Score = 39.5 bits (88), Expect = 0.083
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Frame = +2
Query: 44 LHEQEAEESSDEDPLAFLRDQ---------PQFQQMRAVIQQNPNLLNAVLQQIGQTNPA 196
L E+E E+ S+ED R+ P +R NP AV+++I + +P+
Sbjct: 165 LEEEEDEDDSEEDGDTKGRNDLFDALQEVVPDLTVLRQEFLANPQ---AVMERIERNHPS 221
Query: 197 LLQVISQHQEAFVRMLN 247
L QVI QHQE F+ ++N
Sbjct: 222 LFQVIVQHQETFITLMN 238
>UniRef50_A0L6W4 Cluster: Putative uncharacterized protein
precursor; n=1; Magnetococcus sp. MC-1|Rep: Putative
uncharacterized protein precursor - Magnetococcus sp.
(strain MC-1)
Length = 401
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 86 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQV 208
LA + P +QM A+IQQ + A+ QQ+GQTN + QV
Sbjct: 23 LAAAQPMPSAEQMWAIIQQQQQQIQALQQQLGQTNQQVAQV 63
>UniRef50_A2E9G1 Cluster: UBA/TS-N domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: UBA/TS-N domain containing
protein - Trichomonas vaginalis G3
Length = 291
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 343 SAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQ 468
S+ +++AI RL G+ V+Q + AC K+ENL N L SQ
Sbjct: 250 SSSERDAINRLHDQGYSMMNVLQLFEACGKDENLTKNILQSQ 291
>UniRef50_UPI0000499807 Cluster: UV excision repair protein RAD23;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: UV excision
repair protein RAD23 - Entamoeba histolytica HM-1:IMSS
Length = 360
Score = 36.7 bits (81), Expect = 0.59
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 340 VSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNF 474
+S++D++ I L LGF + +AY KN+ +AAN+L + +
Sbjct: 316 LSSEDQKNITDLMELGFSRSVATEAYIVSNKNKEVAANYLFERGY 360
>UniRef50_A2DY94 Cluster: Ubiquitin family protein; n=1; Trichomonas
vaginalis G3|Rep: Ubiquitin family protein - Trichomonas
vaginalis G3
Length = 330
Score = 36.3 bits (80), Expect = 0.77
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 349 QDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFL 459
++++AI RL+ LGF VIQ + AC+++ENL + L
Sbjct: 290 EEQKAIHRLEKLGFDTTDVIQVFEACDRDENLTKSCL 326
>UniRef50_A2EJT6 Cluster: UBA/TS-N domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: UBA/TS-N domain containing
protein - Trichomonas vaginalis G3
Length = 236
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 352 DKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS 465
+K++I L LG E IQA+ A ++NE +A N L+S
Sbjct: 196 EKKSIRNLIELGISEDQAIQAFIALDRNEAVATNLLIS 233
>UniRef50_A7FT71 Cluster: Sensor histidine kinase; n=4; Clostridium
botulinum|Rep: Sensor histidine kinase - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 447
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 495 NRMTRQKEKVLFFLQNSLF*STQSVYFIHFYRACHYSISNKFLIVQWFI-IFVIMFICLQ 671
N K K+L + F +T ++ F A Y+I K+ ++Q+ I +F+I+ +CL
Sbjct: 78 NNENEDKIKILITIYGVYFANTIYIFIYTFSGARLYNIPLKYTLIQFMIMLFIIVILCLI 137
Query: 672 SK*IYLK*SSNK 707
K I K NK
Sbjct: 138 IKRIGSKKKRNK 149
>UniRef50_A4RTH7 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 411
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +1
Query: 343 SAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFL 459
SA D+E I RL ALGF VI A A NE A L
Sbjct: 371 SAHDEEKIARLTALGFSRQQVIDALNATSGNEEFAGALL 409
>UniRef50_Q22E93 Cluster: Ubiquitin family protein; n=1; Tetrahymena
thermophila SB210|Rep: Ubiquitin family protein -
Tetrahymena thermophila SB210
Length = 558
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 74 DEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
D + LA PQ QQM + NP L +LQQ NP Q++ Q+ + ++ML++P
Sbjct: 148 DPNDLAQAMQSPQVQQMMQQMLSNPQALQQMLQQ----NPYTRQMLEQNPQ-LLQMLSDP 202
>UniRef50_UPI00006CBFBD Cluster: Ubiquitin carboxyl-terminal
hydrolase family protein; n=1; Tetrahymena thermophila
SB210|Rep: Ubiquitin carboxyl-terminal hydrolase family
protein - Tetrahymena thermophila SB210
Length = 808
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +1
Query: 271 GVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAA 450
G+ DE + + Q+ +Q++ D+ A+ +L +GF E+ +A + N LA
Sbjct: 598 GLEGDEFLLENQEGNNNNQDLQNQPQVDEIALLQLLEMGFGENRAKRALIKYQNNTELAT 657
Query: 451 NFLLSQNFDD*VLDL 495
N+L ++ +D LDL
Sbjct: 658 NYLF-ESMEDASLDL 671
>UniRef50_P76079 Cluster: Phenylacetic acid degradation protein
paaC; n=11; Gammaproteobacteria|Rep: Phenylacetic acid
degradation protein paaC - Escherichia coli (strain K12)
Length = 248
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQ 175
E DED LAF RD+ QF + V Q N N + + +Q
Sbjct: 58 ELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQ 97
>UniRef50_UPI000023D2D8 Cluster: hypothetical protein FG07461.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG07461.1
- Gibberella zeae PH-1
Length = 1984
Score = 33.5 bits (73), Expect = 5.5
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +2
Query: 38 RMLHEQEAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQ 217
R E E EE + P+A D+PQ + AV + N LLNA + I ++ P L+
Sbjct: 810 RAASEIEVEEEASAAPIA---DEPQDEADEAVTEDNTELLNAEVNDIEKSPPKPLEKKQD 866
Query: 218 HQEAFVR 238
+ + VR
Sbjct: 867 KEPSPVR 873
>UniRef50_Q56J89 Cluster: RAD23B-like protein; n=1; Adineta
ricciae|Rep: RAD23B-like protein - Adineta ricciae
Length = 244
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 77 EDPLAFLRDQPQFQQMRAVIQQNPNLL 157
ED L L PQFQ +R +IQQNP+ L
Sbjct: 218 EDDLVELSQSPQFQALRQLIQQNPDQL 244
>UniRef50_A7RSU6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 271
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 75 MKTH*PSCEIN-HNFSKCVLLYNRIPIC*MLCY 170
M H PSC I H+ S C ++Y+ +P C ++C+
Sbjct: 1 MYHHVPSCIIMCHHVSSCAIMYHHVPSCIIMCH 33
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 72 LMKTH*PSCEIN-HNFSKCVLLYNRIPIC*MLCY 170
+M H PSC I H+ S C ++Y+ +P C ++C+
Sbjct: 135 IMYHHVPSCIIMYHHVSLCAIMYHHVPSCIIMCH 168
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 72 LMKTH*PSCEIN-HNFSKCVLLYNRIPIC*MLCY 170
+M H PSC I H+ S C ++Y+ +P C ++C+
Sbjct: 205 IMYHHVPSCIIMCHHVSSCAIMYHYVPSCIIMCH 238
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 72 LMKTH*PSCEIN-HNFSKCVLLYNRIPIC*MLC 167
+M H PSC I H+ S C ++Y+ +P C ++C
Sbjct: 20 IMYHHVPSCIIMCHHVSLCAIMYHHVPSCIIMC 52
>UniRef50_Q0FHX2 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
protein - Roseovarius sp. HTCC2601
Length = 171
Score = 33.1 bits (72), Expect = 7.2
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 RMLHEQ-EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVIS 214
+ LH+Q EA+ + E P Q+ A ++ L+ LQ++ Q N ALL+ +
Sbjct: 56 KSLHDQIEAQPETPEAP----EPDAALQEQIAAQREGMQALDGELQRLRQANDALLKSCT 111
Query: 215 QHQEAFVRMLNEP 253
+ +EA L EP
Sbjct: 112 EMREALAENLGEP 124
>UniRef50_A6RBV6 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 679
Score = 33.1 bits (72), Expect = 7.2
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 190 SSFITSNQPTSRSLCQNVK*TRNPSAAGVASDENVADIQQP-QLGSQNVIQVSAQDKEAI 366
S F +N P+ S + +PS + S N D+Q P Q S + + S E I
Sbjct: 590 SQFRPANSPSPSSSTPRIN--IHPSPSNPLSSSNSHDLQPPAQPSSSSPVPASPWPAELI 647
Query: 367 ERLKALGFPEHMVIQAYFACEKNENLAANFLL 462
++ LGF +QA A + A +L+
Sbjct: 648 SKITDLGFTREEAVQALEAAGGDVEGAIGYLI 679
>UniRef50_Q73AM1 Cluster: NADH dehydrogenase subunit 3, putative;
n=1; Bacillus cereus ATCC 10987|Rep: NADH dehydrogenase
subunit 3, putative - Bacillus cereus (strain ATCC
10987)
Length = 103
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 546 LF*STQSVYFIHFYRACHYSISNKFLIVQWFIIFVIMF 659
+F S + +YF+ Y+ISN F + QWF V+ F
Sbjct: 29 IFLSLRIIYFLVVCERLFYNISNFFFLFQWFFYKVVYF 66
>UniRef50_Q4DHZ4 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1081
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 98 RDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
+D P + + ++P L +L I + P L++ I H E F+ ++N P
Sbjct: 178 QDHPVMVCIVEYVDRDPGRLKEILNTIQEEEPGLMRWIETHAEFFLNVINTP 229
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,180,451
Number of Sequences: 1657284
Number of extensions: 10012889
Number of successful extensions: 26817
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 25762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26794
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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