Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1176
(731 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. 97 3e-20
AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair p... 97 3e-20
AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB, ... 97 3e-20
AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, ... 97 3e-20
AY089339-1|AAL90077.1| 290|Drosophila melanogaster AT15685p pro... 52 8e-07
AE014297-3457|AAF56234.1| 290|Drosophila melanogaster CG10694-P... 52 8e-07
BT030410-1|ABO52830.1| 592|Drosophila melanogaster IP08946p pro... 29 4.9
AE014297-2368|AAF55432.1| 277|Drosophila melanogaster CG5829-PA... 29 4.9
L19197-1|AAA28504.1| 312|Drosophila melanogaster eIF-2 beta-sub... 29 8.6
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro... 29 8.6
AY071253-1|AAL48875.1| 312|Drosophila melanogaster RE29270p pro... 29 8.6
AE014296-2158|AAF49902.1| 312|Drosophila melanogaster CG4153-PA... 29 8.6
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ... 29 8.6
>AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein.
Length = 414
Score = 96.7 bits (230), Expect = 3e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFV 235
E S+ DP FLR QPQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+
Sbjct: 231 ERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFL 290
Query: 236 RMLNEP 253
MLN+P
Sbjct: 291 NMLNQP 296
Score = 85.4 bits (202), Expect = 7e-17
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +1
Query: 268 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 447
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403
Query: 448 ANFLLSQNFDD 480
ANFLLS +F+D
Sbjct: 404 ANFLLSSSFED 414
>AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair
protein Rad23 protein.
Length = 414
Score = 96.7 bits (230), Expect = 3e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFV 235
E S+ DP FLR QPQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+
Sbjct: 231 ERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFL 290
Query: 236 RMLNEP 253
MLN+P
Sbjct: 291 NMLNQP 296
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = +1
Query: 268 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 447
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403
Query: 448 ANFLLSQNFDD 480
ANFLLS +FDD
Sbjct: 404 ANFLLSSSFDD 414
>AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB,
isoform B protein.
Length = 343
Score = 96.7 bits (230), Expect = 3e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFV 235
E S+ DP FLR QPQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+
Sbjct: 160 ERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFL 219
Query: 236 RMLNEP 253
MLN+P
Sbjct: 220 NMLNQP 225
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = +1
Query: 268 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 447
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 277 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 332
Query: 448 ANFLLSQNFDD 480
ANFLLS +FDD
Sbjct: 333 ANFLLSSSFDD 343
>AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA,
isoform A protein.
Length = 414
Score = 96.7 bits (230), Expect = 3e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +2
Query: 56 EAEESSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFV 235
E S+ DP FLR QPQF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q+AF+
Sbjct: 231 ERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFL 290
Query: 236 RMLNEP 253
MLN+P
Sbjct: 291 NMLNQP 296
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = +1
Query: 268 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 447
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403
Query: 448 ANFLLSQNFDD 480
ANFLLS +FDD
Sbjct: 404 ANFLLSSSFDD 414
>AY089339-1|AAL90077.1| 290|Drosophila melanogaster AT15685p
protein.
Length = 290
Score = 52.0 bits (119), Expect = 8e-07
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
I ++A++ A+ RL+ALGF M +QAY AC+K+E LAA L+ Q+ +D
Sbjct: 240 ITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEED 288
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +2
Query: 80 DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 247
D L L +MR +I QNP L++ ++ ++ +T+PA +V ++QE + M++
Sbjct: 170 DQLQQLMADLNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMIS 225
>AE014297-3457|AAF56234.1| 290|Drosophila melanogaster CG10694-PA
protein.
Length = 290
Score = 52.0 bits (119), Expect = 8e-07
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +1
Query: 334 IQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQNFDD 480
I ++A++ A+ RL+ALGF M +QAY AC+K+E LAA L+ Q+ +D
Sbjct: 240 ITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEED 288
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +2
Query: 80 DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 247
D L L +MR +I QNP L++ ++ ++ +T+PA +V ++QE + M++
Sbjct: 170 DQLQQLMADLNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMIS 225
>BT030410-1|ABO52830.1| 592|Drosophila melanogaster IP08946p
protein.
Length = 592
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 143 NPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
+P LL L GQ LQV QHQ++ V L+ P
Sbjct: 122 HPALLQHALTPTGQQQQQQLQVQQQHQQSHVERLSPP 158
>AE014297-2368|AAF55432.1| 277|Drosophila melanogaster CG5829-PA
protein.
Length = 277
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 143 NPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEP 253
+P LL L GQ LQV QHQ++ V L+ P
Sbjct: 122 HPALLQHALTPTGQQQQQQLQVQQQHQQSHVERLSPP 158
>L19197-1|AAA28504.1| 312|Drosophila melanogaster eIF-2
beta-subunit protein.
Length = 312
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 602 IMTSSIKVYEIHRLCRLKQ*ILQKKQHFFLLPCHSIKSR 486
++ IK Y CR + ILQK F L C S SR
Sbjct: 249 VLRRYIKEYVTCHTCRSPETILQKDTRLFFLQCESCGSR 287
>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
Length = 1870
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 157 KCCVTADWSDKSSFITSNQPTSRSLCQNVK*TRNPSAAGVASDENVADIQQPQ 315
KC + S S +T N PT+ +LC +V ++ P S+E D QQ Q
Sbjct: 1200 KCLRCSKTSISSGIVTGNGPTAGTLC-SVSTSKKPKLPLGVSEEAHDDPQQQQ 1251
>AY071253-1|AAL48875.1| 312|Drosophila melanogaster RE29270p
protein.
Length = 312
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 602 IMTSSIKVYEIHRLCRLKQ*ILQKKQHFFLLPCHSIKSR 486
++ IK Y CR + ILQK F L C S SR
Sbjct: 249 VLRRYIKEYVTCHTCRSPETILQKDTRLFFLQCESCGSR 287
>AE014296-2158|AAF49902.1| 312|Drosophila melanogaster CG4153-PA
protein.
Length = 312
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 602 IMTSSIKVYEIHRLCRLKQ*ILQKKQHFFLLPCHSIKSR 486
++ IK Y CR + ILQK F L C S SR
Sbjct: 249 VLRRYIKEYVTCHTCRSPETILQKDTRLFFLQCESCGSR 287
>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
protein.
Length = 1711
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 157 KCCVTADWSDKSSFITSNQPTSRSLCQNVK*TRNPSAAGVASDENVADIQQPQ 315
KC + S S +T N PT+ +LC +V ++ P S+E D QQ Q
Sbjct: 1041 KCLRCSKTSISSGIVTGNGPTAGTLC-SVSTSKKPKLPLGVSEEAHDDPQQQQ 1092
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,540,160
Number of Sequences: 53049
Number of extensions: 467847
Number of successful extensions: 1291
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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