Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1173
(771 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 28 0.072
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 24 1.5
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 23 2.0
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 23 3.6
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 22 6.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.2
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 28.3 bits (60), Expect = 0.072
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 613 RNNFSIRYWSWNYRGCWHQTC 551
R+NF + WNY CW C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/25 (32%), Positives = 9/25 (36%)
Frame = -3
Query: 625 ELFNRNNFSIRYWSWNYRGCWHQTC 551
+ NNF W Y CW C
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCWQVDC 1954
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 409 TSKEGSRRANYPLPAREVVTKNNDTGL 489
T + A+YP P E+V + ND +
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENI 276
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 23.4 bits (48), Expect = 2.0
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 355 GNGESGFDSGEGA*ETATTSKEGSRRANYPLPAREVVTKNNDTGLLRGLVIE*VHFKYFN 534
G E ++ E A T + + + LP++E V+K D G V+E +++ +
Sbjct: 148 GKPEQNYEVDESA-SVMTNGRIHGIQPSPTLPSKEEVSKKIDDNQKVGYVVEGRNYRKYR 206
Query: 535 EEQ 543
E+
Sbjct: 207 VEE 209
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 409 TSKEGSRRANYPLPAREVVTKNND 480
T K + A+YP P E++ + D
Sbjct: 242 TPKRNPKEADYPAPLYELIDRKYD 265
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 21.8 bits (44), Expect = 6.2
Identities = 5/16 (31%), Positives = 9/16 (56%)
Frame = -3
Query: 604 FSIRYWSWNYRGCWHQ 557
+++ YW Y WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 3 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 113
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 3 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 113
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 3 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 113
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 3 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 113
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 3 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 113
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,490
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -