Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1171
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.85 
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   2.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +2

Query: 206 WINEIPTVPI 235
           W+NEIPT+P+
Sbjct: 321 WLNEIPTMPV 330


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 95  SIVHKSHCFYIREAHRNSLFLLVSRIP 15
           S VHK HC+ +    R    + +S+IP
Sbjct: 33  SFVHKEHCYVLVRLARFRDSVKLSKIP 59


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 375 SSLKNHYFHCFITYSVGRK 431
           SS    +FHC+     GRK
Sbjct: 416 SSFFQQFFHCYCPIKFGRK 434


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 450 YYRPRTASAQPSK 412
           YYRPRT+  +P +
Sbjct: 232 YYRPRTSRTEPPR 244


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -3

Query: 155 VIVTPAVYPRLLEFLHVDIQSIVHKSHCFYIREAHRNSLFLLVSRI 18
           V +TP V   + +   +    IV  SHC    +  RN + LL  ++
Sbjct: 222 VPLTPVVSEPIYDKKAMSDLMIVKLSHCNSYVDGGRNEIILLCEKV 267


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 48  TMGLADVEAM*FMHNALNVNVKKFKQARVNGGSN 149
           ++GL   +   +  N  +   K  K A+V+GG+N
Sbjct: 157 SLGLTQTQVKIWFQNRRSKYKKMMKAAQVSGGNN 190


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 600 ALFFDRCTAPVKLPAWQC 547
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 600 ALFFDRCTAPVKLPAWQC 547
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 74  NVIYAQCSECQREEIQASAGKRRE*L*LS*GNQMPRHLISDAHEWINEI 220
           + ++ +CS+C   E Q +  K+           + RHLI    +W NE+
Sbjct: 69  DALHTECSKCS--ETQKNGSKK-----------IMRHLIDHKRDWWNEL 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,879
Number of Sequences: 336
Number of extensions: 3727
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)