Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1170
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.0  
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    23   6.0  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -3

Query: 291 RKNVRMLNSRKSNVETPEKRQKRQHRNCKAILTE*IRPCVSDEKYTFRHS 142
           R+  R L  + S  +  + + KRQ + CK +    +   V +EK  F  S
Sbjct: 653 REQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVN--VDEEKVKFERS 700


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 253 RRDPGKKTKKTTPELQSDFDRIDPALCF 170
           RRDP K+ +  +P + + +D I   L F
Sbjct: 106 RRDPNKQKRPRSPNVTAVYDAILEDLVF 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,244
Number of Sequences: 2352
Number of extensions: 9039
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)