Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1170
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.20 
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    22   5.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 308  STYILPEKM*EC*IRERVTSRPRKKDKKDNTGTAK 204
            S Y +P    E  ++ER   RPRK+D+K +    K
Sbjct: 1067 SYYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKTK 1101


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 446 LHKSLCTYLSLNCLF 490
           LH ++CT L+L+ LF
Sbjct: 24  LHNNMCTSLNLSNLF 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,075
Number of Sequences: 438
Number of extensions: 3096
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)