Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1168
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    28   0.094
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.2  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = +3

Query: 306 TANEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFK 425
           T++++ +   +   + +   YP+  Q+T V Q TEP+ ++
Sbjct: 468 TSSKRQRTSPQLSPMSSLPPYPNRTQITEVTQQTEPSIYQ 507


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 712 HFFFVFWKITKINIVSI*YLVFSE*NWY 629
           HF F  WK+   ++ S  YL  +  ++Y
Sbjct: 54  HFTFKSWKVLYTSLTSFGYLFCASLSFY 81


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 218 LSSKRT*VHRTRNFGHHIWQHLRLDRE 298
           LS + T + +  N    +W H+++DRE
Sbjct: 153 LSFRCTKLCKEANKTAFLWYHIKIDRE 179



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 737 IIRNDNPMALFLCFLENNENKYCKYLI 657
           ++  D  + L++  L NN+ KYC  LI
Sbjct: 227 VLLGDLYVTLYI-ILTNNQAKYCTTLI 252


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
 Frame = +1

Query: 541 TYICDI----NEYIWMVERLYI 594
           TYI D+    NEY+  +E LYI
Sbjct: 159 TYIFDVPNFVNEYVQAIEVLYI 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,781
Number of Sequences: 336
Number of extensions: 3809
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)