BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVm1168 (769 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 30 0.32 SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 29 0.55 SPBC215.03c |csn1||COP9/signalosome complex subunit Csn1|Schizos... 29 0.73 SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 29 0.97 SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 27 2.2 SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 27 3.0 SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 3.9 SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase Ups1|Schizos... 26 5.2 SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 9.0 >SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||Manual Length = 556 Score = 30.3 bits (65), Expect = 0.32 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = +1 Query: 43 DVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDA 183 D ++ F T G KD VP + GD+ E EASN I S D+ Sbjct: 58 DAELFMFDTGSADGAKDSVPLDIIAGDNTVKEDEEASNEIPSIWEDS 104 >SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1562 Score = 29.5 bits (63), Expect = 0.55 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = -1 Query: 724 IILWHFFFVFWKITKINIVSI*YLVFSE*NWY---ILTSRYYYKSLLYIA 584 I + +F VF ++ INI+SI LV + W+ I S +Y LY+A Sbjct: 1427 IFIMNFKLVFIEMQYINIISIIVLVLTSLAWFLFNIFISEHYPDKNLYLA 1476 >SPBC215.03c |csn1||COP9/signalosome complex subunit Csn1|Schizosaccharomyces pombe|chr 2|||Manual Length = 422 Score = 29.1 bits (62), Expect = 0.73 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -3 Query: 254 YAFCGLKFSCLKGFDSGVTLIFPVASDTSERI 159 YA+CGL CL ++ + V +DTS+ I Sbjct: 190 YAYCGLANFCLGDYEEALAHFLKVETDTSDGI 221 >SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 28.7 bits (61), Expect = 0.97 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = +3 Query: 288 WIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTR--VLQNTEPA-AFKQYFFT 440 W GK + +K A + + K + W Q+TR VLQ + + FK ++T Sbjct: 304 WTGKNISETQKIVAYSHLYSFTSVKCFVHWAQITRRKVLQMYDDSPGFKPSYYT 357 >SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual Length = 324 Score = 27.5 bits (58), Expect = 2.2 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -1 Query: 520 LFPCFRKYVRAFSF 479 LFP FRKY+ FSF Sbjct: 240 LFPIFRKYIHVFSF 253 >SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosaccharomyces pombe|chr 3|||Manual Length = 354 Score = 27.1 bits (57), Expect = 3.0 Identities = 11/43 (25%), Positives = 23/43 (53%) Frame = +1 Query: 100 PDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQ 228 P+E D++E ++ E+ + L E+S + ++ P FK+ Sbjct: 34 PEEQEKKDEKEDDKEESPSKSLEEISQSVSPVEEEPRDVRFKE 76 >SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizosaccharomyces pombe|chr 2|||Manual Length = 598 Score = 26.6 bits (56), Expect = 3.9 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +3 Query: 309 ANEKSQAMTKAQELLNAKNYPS-WVQVTRVLQNT--EPAAFKQYFFTWRDFGMSHS 467 A++ S + K ++ +K+ W + + L+N EPA+ ++Y W DF S++ Sbjct: 174 ASQISNKLEKEKDATGSKSIEELWEEHQKQLKNAGLEPASLEEYQKQWEDFLKSNN 229 >SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase Ups1|Schizosaccharomyces pombe|chr 1|||Manual Length = 251 Score = 26.2 bits (55), Expect = 5.2 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 Query: 177 RRHGKDQSDATIEAFQARELESTERVILDTI 269 R+ G D+ D+ I + +ELE+TE I DTI Sbjct: 151 RKLGDDRVDSLI-VYATQELENTETQIKDTI 180 >SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces pombe|chr 1|||Manual Length = 635 Score = 25.4 bits (53), Expect = 9.0 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +1 Query: 103 DESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKP 219 D+S GDD++ A + ++ + D KI PL P Sbjct: 562 DDSFSGDDKQVVDVVAPSFVIPRLDDILNKIADKPLYSP 600 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,127,976 Number of Sequences: 5004 Number of extensions: 63887 Number of successful extensions: 166 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 166 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 369323696 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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