Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1168
(769 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 6e-14
SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83) 36 0.048
SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5) 34 0.11
SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 27 0.25
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 27 0.27
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 31 0.77
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 31 1.0
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 31 1.0
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 29 5.5
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 5.5
SB_25062| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_42415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 74.9 bits (176), Expect = 6e-14
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +3
Query: 234 LESTERVILDTISGNIYVWIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEP 413
L++ + ILD S ++VW+GK T NEKS AM + + K YP+W QVTRV++ E
Sbjct: 172 LDTNDCFILDCGSSGVFVWVGKGCTKNEKSAAMKNGIDFIEKKGYPNWTQVTRVVEGGET 231
Query: 414 AAFKQYFFTWRD 449
FKQ+F W D
Sbjct: 232 PIFKQFFSGWTD 243
Score = 35.1 bits (77), Expect = 0.063
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 4 GRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDA 183
GR +V I+D+ KFF ALGS ++ D T R A LS +SDA
Sbjct: 99 GRAQVHIIDECKDKGLESKFFDALGSR-GEIAEDLGT----TRSLRKPARAPSLSTMSDA 153
Query: 184 TGKIKVTPL-SKPFKQENL 237
+G++++ + +KP K+ NL
Sbjct: 154 SGELEMREIEAKPLKKSNL 172
>SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83)
Length = 60
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 282 YVWIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYF 434
YVW+G A+ +E+ +AMT A L ++P ++ VT V + E F F
Sbjct: 11 YVWVGAGASIDERGKAMTYAHNYLGQTDHP-FLPVTVVAEGKETNDFNSAF 60
>SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5)
Length = 237
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 201 DATIEAFQARELEST-----ERVILDTISGNIYVWIGKQATANEKSQAMTKAQELLNA-K 362
D+ E+F+ R EST ++ D + N ++W+G + ++ QA+ A + L A +
Sbjct: 43 DSNSESFEVRLAESTGLLSPTDIVRDVLKDNDFIWLG-SFSYDQMKQAIGSAYKSLRANR 101
Query: 363 NYPSWVQVTRVLQNTEPAAFKQYF 434
+Y + + + VLQN + A K F
Sbjct: 102 SYKRFRRFSSVLQNEQLDACKCKF 125
>SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 201 DATIEAFQARELEST-----ERVILDTISGNIYVWIGKQATANEKSQAMTKAQELLNA-K 362
D+ E+F+ R EST ++ D + N ++W+G + ++ QA+ A + L A +
Sbjct: 43 DSNSESFEVRLAESTGLLSPTDIVRDVLKDNDFIWLG-SFSYDQMKQAIGSAYKSLRANR 101
Query: 363 NYPSWVQVTRVLQNTEPAAFKQYF 434
+Y + + + VLQN + A K F
Sbjct: 102 SYKRFRRFSSVLQNEQLDACKCKF 125
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 26.6 bits (56), Expect(2) = 0.25
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 342 QELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTWRD 449
Q+ A P+W + R+ + E F++ F W D
Sbjct: 1665 QDNKTADTRPAWTLLARLHEKAETILFREKFLDWPD 1700
Score = 25.0 bits (52), Expect(2) = 0.25
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +3
Query: 234 LESTERVILDTISGNIYVWIGKQATANEKSQAMTKAQEL 350
L T+ V++ +YVW G+Q+ + ++ ++L
Sbjct: 1602 LLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQL 1640
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 26.6 bits (56), Expect(2) = 0.27
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 342 QELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTWRD 449
Q+ A P+W + R+ + E F++ F W D
Sbjct: 110 QDNKTADTRPAWTLLARLHEKAETILFREKFLDWPD 145
Score = 25.0 bits (52), Expect(2) = 0.27
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +3
Query: 234 LESTERVILDTISGNIYVWIGKQATANEKSQAMTKAQEL 350
L T+ V++ +YVW G+Q+ + ++ ++L
Sbjct: 47 LLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQL 85
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 261 DTISGNIYVWIGKQATANEKSQAMTKAQEL-LNAKNYPSWVQVTRVLQNTEPAAFKQYF 434
D + +++ WIGK +T +E A K EL ++ + P +Q R +Q E FK YF
Sbjct: 517 DELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKP--IQ-HREVQGFESKLFKSYF 572
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 174 VRRHGKDQSDATIE-AFQARELESTERVILDTISGNIYVWIGKQATANEKSQAMTKAQEL 350
+R G S+ +E AR +E V + N+Y+W+G + +EK + M QE+
Sbjct: 599 LRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKGLNLYLWVGVKCDKDEKFRGM---QEI 655
Query: 351 LNAKN 365
L K+
Sbjct: 656 LKIKS 660
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 261 DTISGNIYVWIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTRV 395
D + +++ WIGK +T +E A K EL YP V+V V
Sbjct: 906 DELKYDVHFWIGKDSTQDEYGTAAYKTVEL---DIYPKSVKVEEV 947
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 201 DATIEAFQARELESTERVILDTISGNIYVWIGKQATANEKSQAMTKAQELLNAKNYPSWV 380
D+ I + E E TE++ D ++ WIG+ +T +E A K EL Y + V
Sbjct: 548 DSYIILWTYEEKEDTEKLCYD-----LHFWIGRGSTQDEYGTAAYKTVEL---DTYLNDV 599
Query: 381 QVT-RVLQNTEPAAFKQYF 434
V R + N E FK YF
Sbjct: 600 PVQHREIMNHESDMFKTYF 618
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +3
Query: 252 VILDTISGNIYVWIGKQATANE--KSQAMTKAQELLNAKNYPSWVQV-TRVLQNTEPA-A 419
V+ + +IY+W+G++A +E ++Q K +E ++ K WV++ R L+ + A +
Sbjct: 358 VMFVDLGDHIYMWVGEEAKKSEVDETQEFIKVREYVSGKVRVPWVKIKERELRQIDVASS 417
Query: 420 FKQY 431
F Q+
Sbjct: 418 FGQF 421
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 25 VDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIK-- 198
+ K SSD DV L +G + ++ + D+E E + L VSDA G+I+
Sbjct: 38 IKKMSSDEDVMAIRRLLKAGRNLGLGEKPSLISDEEAEEKYRGDTKLYRVSDAAGEIQEI 97
Query: 199 -VTPLSKPFKQENLS 240
PL++ EN+S
Sbjct: 98 GERPLTQKLLDENVS 112
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 192 DQSDATIEAFQARELESTERVILDTISGNIYVWIGKQATANEKSQAMTKAQELLNA 359
D T+E +A +ES + V+LD I+G TAN + +E NA
Sbjct: 1860 DDELETLEMIEANGIESVDSVVLDRITGETVAEAEDATTANLIYDLQARYEEEKNA 1915
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 91 DLVPDESTGGDDQEFERNEASNVILSEVSD 180
++VP E G DDQ F R++ N++ +++
Sbjct: 94 EVVPGEELGSDDQVFPRHDNENLVSKTITN 123
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 159 DSL*SVRRHGKDQSDATIEAFQARELESTERVILDTISGNIYVWIGKQATANEKS 323
D++ SV+ H KD I A + E E+ E V GN+ +W+G T + +S
Sbjct: 1746 DNIKSVKFHEKDYD--RIMAVISSEGETVEMVKPVMAQGNVEIWLGTLLTMSRQS 1798
>SB_25062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 767 HFDIFLLS*KIIRNDNPMALFLCFLENNENKYCKY 663
HF L I+ +DNP +C +E KY KY
Sbjct: 17 HFSDLLSHINIVNSDNPNFSVICGIEGCTAKYSKY 51
>SB_7689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/74 (32%), Positives = 31/74 (41%)
Frame = +1
Query: 160 ILSEVSDATGKIKVTPLSKPFKQENLSPQNA*FWTPYLATFTFGSGSRLPQTRNLRP*RK 339
+LS D + + PL +PFK SP L + +G S LP LRP K
Sbjct: 96 LLSPYYDPSSLLPFLPLLRPFKLAPFSPLTTALQACSLLSPYYGPSSLLPFLPLLRP-FK 154
Query: 340 LRNC*TLRTILRGC 381
L L T L+ C
Sbjct: 155 LALFSPLTTALQTC 168
>SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 228 RELESTERVILDTISGNIYVWIGKQATANEKSQAMTKAQELLNAKNYPSWVQVTRVLQN 404
R L + V + + YV++GK A+ +E+ AMT A + L +R+L N
Sbjct: 47 RSLLKEDDVYIFDSGRHCYVYVGKAASIDERRNAMTYAHQPLTCNKLSIDHFRSRILSN 105
>SB_42415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Frame = -2
Query: 387 SLAPTKDSS*RSTIPELSSWPEISRLR*PASRSKRKCC------------QIWCPKLRVL 244
S +P K+ + +++PE + + + ++L PA +SK+ C Q W PK+++
Sbjct: 117 SNSPGKEKTLPASLPEKARYRDTNKLTVPAKQSKKSACKSPESAKNRPAWQTWEPKVKIE 176
Query: 243 WTQVLLLERLR*WRHFDLSR 184
+ L + RH D +R
Sbjct: 177 TEETYSLAKYWTNRHEDPNR 196
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,429,114
Number of Sequences: 59808
Number of extensions: 444832
Number of successful extensions: 1039
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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