Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1168
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   1.5  
AY118045-1|AAM54226.1|   69|Anopheles gambiae xanthine dehydroge...    25   2.6  
AY118043-1|AAM54224.1|   69|Anopheles gambiae xanthine dehydroge...    25   2.6  
AY118044-1|AAM54225.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118042-1|AAM54223.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118041-1|AAM54222.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118040-1|AAM54221.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118039-1|AAM54220.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118038-1|AAM54219.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118037-1|AAM54218.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118036-1|AAM54217.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118035-1|AAM54216.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  
AY118034-1|AAM54215.1|   69|Anopheles gambiae xanthine dehydroge...    24   4.5  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -3

Query: 356  VQQFLSFRHGL--RFLVCGSLLPDP 288
            V Q L+ RH L  RFL C   LPDP
Sbjct: 1053 VHQQLALRHKLVERFLPCYRYLPDP 1077


>AY118045-1|AAM54226.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLMYLREKLRLCGTKLGCAEG 58


>AY118043-1|AAM54224.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLMYLREKLRLCGTKLGCAEG 58


>AY118044-1|AAM54225.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118042-1|AAM54223.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118041-1|AAM54222.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118040-1|AAM54221.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118039-1|AAM54220.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118038-1|AAM54219.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118037-1|AAM54218.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118036-1|AAM54217.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118035-1|AAM54216.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


>AY118034-1|AAM54215.1|   69|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 296 PDPNVNVARYGVQNYAFCGLKFSCLKG 216
           PDP   +  Y  +    CG K  C +G
Sbjct: 32  PDPECTLLVYLREKLRLCGTKLGCAEG 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,491
Number of Sequences: 2352
Number of extensions: 14761
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)