Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1168
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   7.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   9.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.5  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 628 ILTSRYYYKSLLYIAFQPSIYIR 560
           +LTSR +  SL +  FQ + YIR
Sbjct: 301 LLTSRDFLSSLAFRVFQSTQYIR 323


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 375 TKDSS*RSTIPELSSWPEISRLR 307
           T+DSS + TI  LSS  +I+R R
Sbjct: 91  TEDSSRKQTIDPLSSNTQITRKR 113


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 77  VQELRIWCRMRAPAETT 127
           ++  R W R R PA+TT
Sbjct: 162 IKRKRSWSRPREPAQTT 178


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 77  VQELRIWCRMRAPAETT 127
           ++  R W R R PA+TT
Sbjct: 40  IKRKRWWSRPREPAQTT 56


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 631 YILTSRYYYKSLLYIAFQPSIYIRLYH 551
           Y+  +  Y   L  +AF    Y+ +YH
Sbjct: 112 YVSETSSYVSVLTIVAFSIERYLAIYH 138


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 688 FSRKQRKSAIGLSFLI 735
           F R+  +SA+GL+FL+
Sbjct: 72  FLRRYGQSAVGLTFLL 87


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 559 NEYIWMVERLY 591
           NEYIW+V   Y
Sbjct: 370 NEYIWIVSNKY 380


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +2

Query: 401 EHGACSIQAVLLHLARLRNVSLASHLKAKSTYVLPEAREKL 523
           EH A + Q +  HL   + +     L  K   ++   REK+
Sbjct: 423 EHKAAADQKLEKHLIEYKKMLKIKRLFGKDRKIMDMVREKI 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,784
Number of Sequences: 438
Number of extensions: 4722
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)