Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1166
(755 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.44
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 4.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 7.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.4
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 25.8 bits (54), Expect = 0.44
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 1 EEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKL 162
E+++ ++IL G YD+ +R S E + G + N+ I TMEY +L
Sbjct: 32 EKEVLDNIL-GGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQL 84
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 1 EEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKL 162
E+++ ++IL G YD+ +R S E + G + N+ I MEY +L
Sbjct: 32 EKEVLDNIL-GGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQL 84
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 744 NARLLHYS*TYNSAFGRLER 685
N +HY+ Y+S +GR +R
Sbjct: 592 NQAAIHYNLPYSSLYGRFKR 611
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 627 GLAVSRGVHDRTELQGIVELAIVDEEQDVVFVLGGLEEPFSLVLSALLPPY 475
G+ ++GV +QG+ + V Q V +L G+++ F + + PY
Sbjct: 846 GVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQGVQGMNVPY 896
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 374 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 687 RCNEPRVDVRKTGDFTIVSNGLAVSRG 607
+CN+ + D+ +TG +G SRG
Sbjct: 67 QCNDKKTDIEETGRGKGRGHGKGGSRG 93
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 371 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 371 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 469
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,167
Number of Sequences: 438
Number of extensions: 4685
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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