Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1165
(331 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase prot... 31 0.26
Z92815-3|CAB07291.1| 307|Caenorhabditis elegans Hypothetical pr... 29 1.0
U58748-5|AAP31419.1| 285|Caenorhabditis elegans Hypothetical pr... 27 2.4
U58748-4|AAB52967.1| 522|Caenorhabditis elegans Hypothetical pr... 27 2.4
U53332-10|AAK31530.1| 136|Caenorhabditis elegans Frataxin (invo... 27 3.2
AY048153-1|AAL05950.1| 136|Caenorhabditis elegans frataxin prot... 27 3.2
AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical ... 27 3.2
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 26 5.5
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 26 5.5
AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical... 26 5.5
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 26 7.3
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 26 7.3
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 26 7.3
AF125455-1|AAP13748.1| 210|Caenorhabditis elegans Ubiquitin-lik... 26 7.3
Z77665-6|CAE17861.1| 123|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acet... 25 9.7
AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholine... 25 9.7
AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or ad... 25 9.7
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 25 9.7
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 25 9.7
>L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase protein
1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 0.26
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = -3
Query: 221 RRHWENIVVTGKTSSYWENIVVLGKHRRTGKTSSYWENIVVLGKHRRTGKTSSYWENIVV 42
R+ W N ++ K S ++ + V+ HR+ G S L HR K ++
Sbjct: 125 RQRWHNALIQLKRSGEYDRLSVM--HRQVGSASGAHSGPGFLVWHREYMKRMEIALRMID 182
Query: 41 TGKTSSYWENIV 6
G + YW++++
Sbjct: 183 PGISMPYWDSVL 194
>Z92815-3|CAB07291.1| 307|Caenorhabditis elegans Hypothetical
protein W01F3.2 protein.
Length = 307
Score = 28.7 bits (61), Expect = 1.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 62 YWENIVVTGKTSSYWENI 9
YW ++TG+T SY+EN+
Sbjct: 243 YWNKSLMTGRTESYFENL 260
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 266 KHRRTGKTSS*LGKHRRHWENIVVTGKTSSYWENI 162
KH+ + +W ++TG+T SY+EN+
Sbjct: 226 KHQLLLSNGGKFALYDEYWNKSLMTGRTESYFENL 260
Score = 25.8 bits (54), Expect = 7.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 291 WENIVVTGKTSSYWENI 241
W ++TG+T SY+EN+
Sbjct: 244 WNKSLMTGRTESYFENL 260
>U58748-5|AAP31419.1| 285|Caenorhabditis elegans Hypothetical
protein ZK180.3b protein.
Length = 285
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 123 RCFPSTTMFSQYDDVFPVRRXFPSHDDVFPVTTMFSQS 236
+ P FS + D+FP D + V TMFS S
Sbjct: 52 KSIPELEQFSTFSDLFPKFSEGIDRDSIHAVFTMFSHS 89
>U58748-4|AAB52967.1| 522|Caenorhabditis elegans Hypothetical
protein ZK180.3a protein.
Length = 522
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 123 RCFPSTTMFSQYDDVFPVRRXFPSHDDVFPVTTMFSQS 236
+ P FS + D+FP D + V TMFS S
Sbjct: 200 KSIPELEQFSTFSDLFPKFSEGIDRDSIHAVFTMFSHS 237
>U53332-10|AAK31530.1| 136|Caenorhabditis elegans Frataxin
(involved in human friedrich'sataxia) homolog protein 1
protein.
Length = 136
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 155 VRRCFPSTTXFSQSRRCFPSDDDVFPVTTMFSQYDDVFPVTTMF--SH*RGCFPID 316
VRR F S+ FSQ+ +D + ++ F Q D FPV+ F SH G ++
Sbjct: 11 VRRSF-SSRIFSQNEYETAADSTLERLSDYFDQIADSFPVSEQFDVSHAMGVLTVN 65
>AY048153-1|AAL05950.1| 136|Caenorhabditis elegans frataxin
protein.
Length = 136
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 155 VRRCFPSTTXFSQSRRCFPSDDDVFPVTTMFSQYDDVFPVTTMF--SH*RGCFPID 316
VRR F S+ FSQ+ +D + ++ F Q D FPV+ F SH G ++
Sbjct: 11 VRRSF-SSRIFSQNEYETAADSTLERLSDYFDQIADSFPVSEQFDVSHAMGVLTVN 65
>AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical
protein ZK355.6 protein.
Length = 465
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 170 ENIVVLGKHRRTGKTSSYWENIVVLGKHRRTGKTSSYWENIVVTG 36
E++ LGK + G S + ++G HR T + ENI+ +G
Sbjct: 382 EDLGFLGKLKFIGNLDSDALTVQIVGNHRLTFAYIPWLENIITSG 426
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = -2
Query: 156 TGKTSSYWENIVVLGKH----RRTGKTSSYWENIVVLGKHRRHWEN 31
T S++W N+ + G + T +SS W + V G H H N
Sbjct: 9 TTPLSAWWNNMSLSGIYPSISTSTPSSSSSWSSHFVFGGHHHHTNN 54
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 26.2 bits (55), Expect = 5.5
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Frame = +2
Query: 74 SQYDDVFPVRRCFPSTTMFSQY-------DDVFPVRRCFPSTTXFSQSRRCFPSDDDVFP 232
S+ D P + STT +Q DD PV S+ S+ S D
Sbjct: 364 SELHDYSPTFKSTESTTSVTQTTEKGPDSDDTSPVGSSTSSSAFTSEKTTKKGSTDTTTS 423
Query: 233 VTTMFSQYDDVFPVT 277
V S++DDV P+T
Sbjct: 424 VELSTSKFDDVSPIT 438
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = -2
Query: 156 TGKTSSYWENIVVLGKH----RRTGKTSSYWENIVVLGKHRRHWEN 31
T S++W N+ + G + T +SS W + V G H H N
Sbjct: 9 TTPLSAWWNNMSLSGIYPSISTSTPSSSSSWSSHFVFGGHHHHTNN 54
>AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical
protein Y51A2D.20 protein.
Length = 138
Score = 26.2 bits (55), Expect = 5.5
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 267 KTSSYWENIVVTGKTSSSLGKHRRDWENX---VVLGKHRRTGKTSSYWENI 124
+ SS++E I + SS L + R E +V K R KT SY+EN+
Sbjct: 59 QNSSFFEPIAHSTPNSSILEERRVVGEGEKRELVRDKEERIDKTLSYYENV 109
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
resistance related protein2 protein.
Length = 1525
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 157 YWENIVVLGKHRRTGKTSSYWENIVVLGKHRRTGKTSSSL 38
Y+ ++ LG H R+ TS+ + + L R GKT ++
Sbjct: 357 YYHSMFRLGMHVRSVLTSAVYSKALNLSNEARKGKTIGAI 396
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 176 YWENIVVLGKHRRTGKTSSYWENIVVLGKHRRTGKT 69
Y+ ++ LG H R+ TS+ + + L R GKT
Sbjct: 357 YYHSMFRLGMHVRSVLTSAVYSKALNLSNEARKGKT 392
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
resistance protein familyprotein 2 protein.
Length = 1525
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 157 YWENIVVLGKHRRTGKTSSYWENIVVLGKHRRTGKTSSSL 38
Y+ ++ LG H R+ TS+ + + L R GKT ++
Sbjct: 357 YYHSMFRLGMHVRSVLTSAVYSKALNLSNEARKGKTIGAI 396
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 176 YWENIVVLGKHRRTGKTSSYWENIVVLGKHRRTGKT 69
Y+ ++ LG H R+ TS+ + + L R GKT
Sbjct: 357 YYHSMFRLGMHVRSVLTSAVYSKALNLSNEARKGKT 392
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 285 NIVVTGKTSSYWENIVVTGKTSSS 214
NIVVT + W N V GKTS+S
Sbjct: 343 NIVVTEPSYFAWLNSVFDGKTSNS 366
>AF125455-1|AAP13748.1| 210|Caenorhabditis elegans Ubiquitin-like
protease protein 3 protein.
Length = 210
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = -1
Query: 250 GKHRRDWENIVVTGKTSS*LGKXRRTGKTSSYWENIVV 137
G H + ++ K++ +GK + KT +W +++V
Sbjct: 168 GLHVAQYLAVLAEQKSADAIGKLEKIDKTRGFWRDLIV 205
>Z77665-6|CAE17861.1| 123|Caenorhabditis elegans Hypothetical
protein K02E11.9 protein.
Length = 123
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 173 WENIVVLGKHRRTGKTSSYWENIVVLGKHRRTGKTSSYWEN--IVVTGKTSSY 21
WE + + + KT +WEN V K ++GKT +Y +N +++ K S Y
Sbjct: 51 WEEHLYRVCNGKNKKTCGFWEN-VKTKKKVKSGKT-TYNKNKKVLIVNKMSIY 101
>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical
protein ZK930.1 protein.
Length = 1354
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 135 STTMFSQYDDVFPVRRXFPSHDDVFPVTTMFSQSRR 242
S+T + Q D P + F +HD+ T F SRR
Sbjct: 155 SSTNWLQITDFAPFKPCFLTHDNPSSFTFFFDTSRR 190
>AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal
acetylcholinesterase protein2 protein.
Length = 629
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = -2
Query: 291 WENIVVTGKTSSYWENIVVTGKTSSSLGKHRRDWENXVVLGKH 163
W N TG+T S+W + + LG+ ++ ++ H
Sbjct: 528 WANFANTGRTDSFWPQYNKIERKAIELGETTLQGKHRIISDVH 570
>AF025378-1|AAC14016.2| 629|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 629
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = -2
Query: 291 WENIVVTGKTSSYWENIVVTGKTSSSLGKHRRDWENXVVLGKH 163
W N TG+T S+W + + LG+ ++ ++ H
Sbjct: 528 WANFANTGRTDSFWPQYNKIERKAIELGETTLQGKHRIISDVH 570
>AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform b protein.
Length = 979
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 249 ENIVVTGKTSSSLGKHRRDWENXVVLGKHRRTGKTSSYWENIVVLGKHRRTGK 91
++I+ GK S K + +N GK RRT TSS E+ +V +R G+
Sbjct: 502 DDIIGGGKKKKSTKKDGK--KNGKKSGKKRRTTSTSSEEEDRIVHKVNRNDGE 552
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 249 ENIVVTGKTSSSLGKHRRDWENXVVLGKHRRTGKTSSYWENIVVLGKHRRTGK 91
++I+ GK S K + +N GK RRT TSS E+ +V +R G+
Sbjct: 774 DDIIGGGKKKKSTKKDGK--KNGKKSGKKRRTTSTSSEEEDRIVHKVNRNDGE 824
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 129 FPSTTMFSQYDDVFPVRRXFPSHDDVFPVTTMFSQSRRCFPST 257
+ +TT F Y FP R +P FP +Q RC+P T
Sbjct: 54 YDATTGFC-YLSRFPTTRPYPPP---FPTRPRPTQGHRCYPGT 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,730,823
Number of Sequences: 27780
Number of extensions: 225480
Number of successful extensions: 728
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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