Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1165
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   5.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   6.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   8.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    20   8.9  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 326 KHSRQWENILVNGKTSSLLGKHRR 255
           K  R W     + +T+S  G HR+
Sbjct: 42  KRKRSWSRPRESAQTTSKAGIHRK 65


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 179 TXFSQSRRCFPSDDDVFPVT 238
           T  S+++ CF  DD + P T
Sbjct: 439 TCNSKTKCCFAQDDGLCPYT 458


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 5/16 (31%), Positives = 8/16 (50%)
 Frame = -2

Query: 84  SYWENIVVLGKHRRHW 37
           +YW   + +  H  HW
Sbjct: 197 AYWREDIGINLHHWHW 212


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 79  LGKHRRTGKTSSSL 38
           LG H + G T SSL
Sbjct: 171 LGHHHQNGATPSSL 184


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 73  KHRRTGKTSSSLGKHR 26
           KHR TG+T  S  K R
Sbjct: 184 KHRLTGETRLSATKGR 199


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 247 KHRRDWENIVVTGKTSS*LGKXRRTGKTSSYWE 149
           K +R W       +T+S  G  R+    S +W+
Sbjct: 163 KRKRSWSRPREPAQTTSKAGIHRKKVLLSVWWD 195


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,587
Number of Sequences: 438
Number of extensions: 2861
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)