Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1164
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   6.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   6.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 200 GHVNYCFTE-YFHHS*IRSVKKYLKASSSKLERIHV 304
           G ++   TE YF  + +R+V+++  A   +LE+IH+
Sbjct: 88  GDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHL 123


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 332 DYIPRDHSFKHVFSLVCLMMLLNIFLHF 249
           DY     S+ H+FSL+   +++ + L F
Sbjct: 191 DYFFGKMSYSHIFSLMDYNIVMALVLQF 218


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 332 DYIPRDHSFKHVFSLVCLMMLLNIFLHF 249
           DY     S+ H+FSL+   +++ + L F
Sbjct: 191 DYFFGKMSYSHIFSLMDYNIVMALVLQF 218


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 332 DYIPRDHSFKHVFSLVCLMMLLNIFLHF 249
           DY     S+ H+FSL+   +++ + L F
Sbjct: 191 DYFFGKMSYSHIFSLMDYNIVMALVLQF 218


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 700 YL*LIFH*TYTSYFIHKLFILC 765
           Y+ L+F   +  + +H LF+LC
Sbjct: 263 YMHLLFCCAFIIFTMHLLFLLC 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,251
Number of Sequences: 336
Number of extensions: 3935
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)