Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1164
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183...    28   7.1  

>08_02_0113 -
           12715888-12716181,12717443-12717602,12718327-12718368,
           12718443-12718465,12718616-12720653,12720736-12720965,
           12722207-12722329,12722438-12723010,12724684-12724733,
           12726828-12726923,12726987-12727394,12727609-12727795
          Length = 1407

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 137 LSTCYELFTMIGHVLNYKDITGHVNYCFTEY 229
           L +CY     +G +  YK + G V+Y   EY
Sbjct: 385 LLSCYRCLIYLGDLTRYKGLYGDVDYASREY 415


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,365,180
Number of Sequences: 37544
Number of extensions: 322769
Number of successful extensions: 508
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)