Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1162
         (730 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 31   4.2  
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.     31   4.2  
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.              31   4.2  
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.     31   4.2  
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated...    30   9.8  

>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +3

Query: 477  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 656
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 2589 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2646

Query: 657  ATLGYPVEHSF 689
             TL +P+   F
Sbjct: 2647 RTLNHPLGGEF 2657


>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
          Length = 4025

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +3

Query: 477  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 656
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707

Query: 657  ATLGYPVEHSF 689
             TL +P+   F
Sbjct: 1708 RTLNHPLGGEF 1718


>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
          Length = 2185

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +3

Query: 477  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 656
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707

Query: 657  ATLGYPVEHSF 689
             TL +P+   F
Sbjct: 1708 RTLNHPLGGEF 1718


>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
          Length = 3310

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +3

Query: 477  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 656
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 2034 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2091

Query: 657  ATLGYPVEHSF 689
             TL +P+   F
Sbjct: 2092 RTLNHPLGGEF 2102


>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
            protein protein.
          Length = 5005

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +2

Query: 506  ISRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAA-SSGHFGLPRR- 679
            +SRS E++   P+ R S  S PY PS     + +  Q R +   +S A S  +F      
Sbjct: 1345 VSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRSMDSSMSMADSEAYFSAAEEF 1401

Query: 680  TLVFKDE--GTIIEKKKKK 730
              +  DE  GT   +KKKK
Sbjct: 1402 EPISSDEGPGTYPGRKKKK 1420


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,703,815
Number of Sequences: 237096
Number of extensions: 2482810
Number of successful extensions: 6746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6746
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)