Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1160
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   1.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.6  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.6  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   4.6  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   4.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   6.1  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   8.0  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   8.0  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   8.0  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 577  PLVRASSELTVERRSYRIVPIAHKRNRHDLTARK 476
            P    ++  T  RRS  + P+ ++RN H LT  +
Sbjct: 1028 PTAGENAYSTTHRRSQTLSPVRNERNYHTLTTTR 1061


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 266 SQSLSEVTDPICRLPLPTLFYR 201
           ++SLS +  P CRLP P L  R
Sbjct: 93  TRSLSNLELPSCRLPCPNLIPR 114


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 261 LALRTGACRVWTGSGCGRCRVWSM 332
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = -2

Query: 387 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIRSYGSNL-----PTS 223
           +R  +  + T    HN  +  RP TGR R     D+       ++ S G+ L     P +
Sbjct: 110 VRSGFTLLQTASTPHNRNSDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTLCAASSPNA 169

Query: 222 LTYIILSTRGSSPWRPAADMGTN 154
            T   ++ +  +P +P   +GT+
Sbjct: 170 YTNTTIAVQ-PAPTQPHELVGTD 191


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 447 GPAFSGLPRIFLAVRSCRFRLCAIGTILYD 536
           G    G   +FL   SCR+  C +G ++ D
Sbjct: 350 GTQVIGTTEVFLDRESCRWCECTLGDLIAD 379


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 742 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 632
           D +F  L RV  TPA  P  +EFL + D      + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 562 SSELTVERRSYRIVPIAHKRNRH 494
           S++  +E +  R+ PIA  RNRH
Sbjct: 340 SADDIIELQDIRMSPIASLRNRH 362


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 462 GLPRIFLAVRSCRFRLCAIGTILYD 536
           G+ R+FL+  +CR   C  G+ + D
Sbjct: 362 GVSRVFLSKPACRTGECNFGSFVAD 386


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 462 GLPRIFLAVRSCRFRLCAIGTILYD 536
           G+ R+FL+  +CR   C  G+ + D
Sbjct: 362 GVSRVFLSKPACRTGECNFGSFVAD 386


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,898
Number of Sequences: 2352
Number of extensions: 18158
Number of successful extensions: 57
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)