Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1160
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ664180-1|ABG47460.1| 421|Homo sapiens beta arrestin 2 splice ... 31 3.5
L04685-2|AAA35558.1| 410|Homo sapiens beta-arrestin 1 protein. 31 6.1
L04685-1|AAA35559.1| 418|Homo sapiens beta-arrestin 1 protein. 31 6.1
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 6.1
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 6.1
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 6.1
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 6.1
DQ314865-1|ABC40724.1| 418|Homo sapiens arrestin, beta 1 protein. 30 8.1
BC003636-1|AAH03636.1| 418|Homo sapiens arrestin, beta 1 protein. 30 8.1
AF084940-1|AAC34123.1| 410|Homo sapiens beta-arrestin 1B protein. 30 8.1
AF084040-1|AAC33295.1| 418|Homo sapiens beta-arrestin 1A protein. 30 8.1
>DQ664180-1|ABG47460.1| 421|Homo sapiens beta arrestin 2 splice
variant protein.
Length = 421
Score = 31.5 bits (68), Expect = 3.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 514 AHKRNRHDLTARKIRGRPENAGPDP-VRNVRRF 419
+HKRN L RK++ PE GP P RRF
Sbjct: 159 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRRF 191
>L04685-2|AAA35558.1| 410|Homo sapiens beta-arrestin 1 protein.
Length = 410
Score = 30.7 bits (66), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 511 HKRNRHDLTARKIRGRPENAGPDPVRNVRR 422
HKRN L RK++ PE GP P R
Sbjct: 159 HKRNSVGLVIRKVQYAPERPGPQPTAETTR 188
>L04685-1|AAA35559.1| 418|Homo sapiens beta-arrestin 1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 511 HKRNRHDLTARKIRGRPENAGPDPVRNVRR 422
HKRN L RK++ PE GP P R
Sbjct: 159 HKRNSVGLVIRKVQYAPERPGPQPTAETTR 188
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 15 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 146
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 15 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 146
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 15 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 146
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 15 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 146
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>DQ314865-1|ABC40724.1| 418|Homo sapiens arrestin, beta 1 protein.
Length = 418
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 511 HKRNRHDLTARKIRGRPENAGPDPVRNVRR 422
HKRN L RK++ PE GP P R
Sbjct: 159 HKRNSVRLVIRKVQYAPERPGPQPTAETTR 188
>BC003636-1|AAH03636.1| 418|Homo sapiens arrestin, beta 1 protein.
Length = 418
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 511 HKRNRHDLTARKIRGRPENAGPDPVRNVRR 422
HKRN L RK++ PE GP P R
Sbjct: 159 HKRNSVRLVIRKVQYAPERPGPQPTAETTR 188
>AF084940-1|AAC34123.1| 410|Homo sapiens beta-arrestin 1B protein.
Length = 410
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 511 HKRNRHDLTARKIRGRPENAGPDPVRNVRR 422
HKRN L RK++ PE GP P R
Sbjct: 159 HKRNSVRLVIRKVQYAPERPGPQPTAETTR 188
>AF084040-1|AAC33295.1| 418|Homo sapiens beta-arrestin 1A protein.
Length = 418
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 511 HKRNRHDLTARKIRGRPENAGPDPVRNVRR 422
HKRN L RK++ PE GP P R
Sbjct: 159 HKRNSVRLVIRKVQYAPERPGPQPTAETTR 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,513,950
Number of Sequences: 237096
Number of extensions: 2648702
Number of successful extensions: 6703
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6703
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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