Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1159
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 6.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.7
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.9
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 4 GDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKL 135
G YD+ +R S E + G + N+ I TMEY +L
Sbjct: 41 GGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQL 84
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 718 NARLLHYS*TYNSAFGRLER 659
N +HY+ Y+S +GR +R
Sbjct: 592 NQAAIHYNLPYSSLYGRFKR 611
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 348 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 348 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 348 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 348 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 348 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 348 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 348 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 205 NYVKIIYRNYNLALKLGPQPIP 270
NY K+ Y+NY + ++ P P+P
Sbjct: 112 NYKKL-YKNYIINIEQIPVPVP 132
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 205 NYVKIIYRNYNLALKLGPQPIP 270
NY K+ Y+NY + ++ P P+P
Sbjct: 112 NYKKL-YKNYIINIEQIPVPVP 132
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 214 KIIYRNYNLALKLGPQPIP 270
K+ Y+NY + ++ P P+P
Sbjct: 103 KLYYKNYIINIEQIPVPVP 121
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 214 KIIYRNYNLALKLGPQPIP 270
K+ Y+NY + ++ P P+P
Sbjct: 114 KLYYKNYIINIEQIPVPVP 132
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 661 RCNEPRVDVRKTGDFTIVSNGLAVSRG 581
+CN+ + D+ +TG +G SRG
Sbjct: 67 QCNDKKTDIEETGRGKGRGHGKGGSRG 93
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 214 KIIYRNYNLALKLGPQPIP 270
K+ Y+NY + ++ P P+P
Sbjct: 344 KLYYKNYIINIEQIPVPVP 362
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 214 KIIYRNYNLALKLGPQPIP 270
K+ Y+NY + ++ P P+P
Sbjct: 339 KLYYKNYIINIEQIPVPVP 357
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 345 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 345 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 443
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,329
Number of Sequences: 438
Number of extensions: 4379
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -