Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1157
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590...    29   6.6  
03_05_0183 - 21681673-21682524                                         28   8.7  

>01_05_0706 +
           24457148-24458031,24458621-24458822,24458896-24459080,
           24459170-24459503,24459614-24459818,24460022-24460128,
           24460220-24460381
          Length = 692

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -3

Query: 521 LAGFARLASAL----EAFRHNPADGXSHHRPLG 435
           LAG  RLA AL    EA R +PA+G +H R  G
Sbjct: 259 LAGLGRLADALRDCEEAVRLDPANGRAHSRLAG 291


>03_05_0183 - 21681673-21682524
          Length = 283

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +1

Query: 202 SQAFIATLLFDPSMSALPSLXXKIRQALDCSPIKRERELGLDRRETG 342
           SQAF A LL D + +A+P +  + R A + +  + E E    RR TG
Sbjct: 229 SQAFSAVLLADANRAAIPVVVVQKRPAPE-TETETEEEPPRQRRRTG 274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,633,918
Number of Sequences: 37544
Number of extensions: 404985
Number of successful extensions: 893
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)