Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1157
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   5.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   7.1  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 424 SCTRPSGRWCEXPSAGLCL 480
           SC RP G  C  P  G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -3

Query: 545 SGLHSEHILAGFARLASALEAFRHNPADGXSHHRPLGRVHEPNVRNCGS 399
           +GL+S HI    +  + + +   H+P +G  ++ P G  + P   N G+
Sbjct: 351 AGLNSSHIYTTPSSNSLSTQ-HSHSPVNGYGNNHPTGGSNLPGNNNGGA 398


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 498  SQPSESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRSSK 620
            +QPSES K     E  + G       +S+ S SKR+   +K
Sbjct: 1563 AQPSESAKGTTRRERSKQGRKVSDQSSSQTSPSKRKDSVTK 1603


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,601
Number of Sequences: 2352
Number of extensions: 13594
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)