Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1156
         (634 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    52   1e-06
L10333-1|AAA59950.1|  776|Homo sapiens nueroendocrine-specific p...    36   0.12 
BC111694-1|AAI11695.1|  702|Homo sapiens RTN1 protein protein.         36   0.12 
BC090862-1|AAH90862.1|  776|Homo sapiens reticulon 1 protein.          36   0.12 
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   7.8  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   7.8  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = +2

Query: 503 KKNVAMNAWLPQASYPCGNFSGTSC*K 583
           K +VAMNAW PQASYPCGNFS TSC K
Sbjct: 11  KSDVAMNAWPPQASYPCGNFSDTSCLK 37


>L10333-1|AAA59950.1|  776|Homo sapiens nueroendocrine-specific
           protein A protein.
          Length = 776

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +1

Query: 13  EPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDFS 189
           E +H+ + +P+L  +D   K K   I ++ P G+R        E +++K H LE   F+
Sbjct: 204 EVKHQEQHHPELEDKDLDFKNKDTDISIK-PEGVREPDKPAPVEGKIIKDHLLEESTFA 261


>BC111694-1|AAI11695.1|  702|Homo sapiens RTN1 protein protein.
          Length = 702

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +1

Query: 13  EPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDFS 189
           E +H+ + +P+L  +D   K K   I ++ P G+R        E +++K H LE   F+
Sbjct: 130 EVKHQEQHHPELEDKDLDFKNKDTDISIK-PEGVREPDKPAPVEGKIIKDHLLEESTFA 187


>BC090862-1|AAH90862.1|  776|Homo sapiens reticulon 1 protein.
          Length = 776

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +1

Query: 13  EPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDFS 189
           E +H+ + +P+L  +D   K K   I ++ P G+R        E +++K H LE   F+
Sbjct: 204 EVKHQEQHHPELEDKDLDFKNKDTDISIK-PEGVREPDKPAPVEGKIIKDHLLEESTFA 261


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -3

Query: 308 HALGRAAGGAKLPSAGLC*TPLRPKPA*PNPARICSLWSPE 186
           H    A  G   P++  C TP  P P  P PA +CS  SPE
Sbjct: 51  HLQAFAQPGTHFPTSN-C-TPTPPTPVLPGPASLCSPASPE 89


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -3

Query: 308 HALGRAAGGAKLPSAGLC*TPLRPKPA*PNPARICSLWSPE 186
           H    A  G   P++  C TP  P P  P PA +CS  SPE
Sbjct: 51  HLQAFAQPGTHFPTSN-C-TPTPPTPVLPGPASLCSPASPE 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,075,479
Number of Sequences: 237096
Number of extensions: 2000279
Number of successful extensions: 3987
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3987
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)