Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1156
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   3.0  
AY069521-1|AAL39666.2|  958|Drosophila melanogaster LD23810p pro...    29   6.9  
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    29   6.9  
AE013599-3105|AAF46654.1|  957|Drosophila melanogaster CG9346-PA...    29   6.9  

>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 291 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 383
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>AY069521-1|AAL39666.2|  958|Drosophila melanogaster LD23810p protein.
          Length = 958

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -3

Query: 194  SPEKSGGSKQCDF---TSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVR 24
            SP   G SK+ D+   TSR S S +  R RSP  S +        +R+SR       S R
Sbjct: 869  SPFSGGESKRRDYSPETSRSSKSSKRNRSRSPSSSPKRYTE--RSSRSSRYETPASGSSR 926

Query: 23   CRGS 12
             R S
Sbjct: 927  SRSS 930


>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
           protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 176 LPTSRGSTVSISLPDSARLASALEAFSIIPRMVASH 283
           LPTS G+T    LP +A+  S+L +  + P + AS+
Sbjct: 865 LPTSTGTTQLTMLPLTAKATSSLGSMPMFPSIQASY 900


>AE013599-3105|AAF46654.1|  957|Drosophila melanogaster CG9346-PA
            protein.
          Length = 957

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -3

Query: 194  SPEKSGGSKQCDF---TSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVR 24
            SP   G SK+ D+   TSR S S +  R RSP  S +        +R+SR       S R
Sbjct: 868  SPFSGGESKRRDYSPETSRSSKSSKRNRSRSPSSSPKRYTE--RSSRSSRYETPASGSSR 925

Query: 23   CRGS 12
             R S
Sbjct: 926  SRSS 929


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,876,633
Number of Sequences: 53049
Number of extensions: 602550
Number of successful extensions: 1320
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)