Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1155
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.1  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 144 FMHSAERPVVRSYHPRDY 91
           F    E P  R+Y+P DY
Sbjct: 310 FFRELEAPCPRNYNPADY 327


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 144 FMHSAERPVVRSYHPRDY 91
           F    E P  R+Y+P DY
Sbjct: 310 FFRELEAPCPRNYNPADY 327


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 550 ALFFDRCTAPVKLPAWQC 603
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 550 ALFFDRCTAPVKLPAWQC 603
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 500 FCSREVSVLAELALGHLRYSLTDVP 574
           FCS +    A+  +GHLR+     P
Sbjct: 24  FCSFQGVPYAQPPIGHLRFKAPQAP 48


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 500 FCSREVSVLAELALGHLRYSLTDVP 574
           FCS +    A+  +GHLR+     P
Sbjct: 26  FCSFQGVPYAQPPIGHLRFKAPQAP 50


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 500 FCSREVSVLAELALGHLRYSLTDVP 574
           FCS +    A+  +GHLR+     P
Sbjct: 24  FCSFQGVPYAQPPIGHLRFKAPQAP 48


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 500 FCSREVSVLAELALGHLRYSLTDVP 574
           FCS +    A+  +GHLR+     P
Sbjct: 26  FCSFQGVPYAQPPIGHLRFKAPQAP 50


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 599 SVSNRITREF*TATSVFRHVTTLH 670
           S SNR TR      +  RH TT H
Sbjct: 264 SPSNRFTRHLIQRRTHTRHTTTSH 287


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 135 SAERPVVRSYHPRDY 91
           SA  P+VRSY P  Y
Sbjct: 281 SAATPLVRSYAPERY 295


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 130 RAAGGAKLPSAGLC 89
           ++  G ++PSAGLC
Sbjct: 99  KSCQGCEMPSAGLC 112


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 130 RAAGGAKLPSAGLC 89
           ++  G ++PSAGLC
Sbjct: 47  KSCQGCEMPSAGLC 60


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 130 RAAGGAKLPSAGLC 89
           ++  G ++PSAGLC
Sbjct: 230 KSCQGCEMPSAGLC 243


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = -3

Query: 641 SSPFKTPA*SGSRHCQAGSLTGAVH-LSKNNAGVLR--PAQRGQKPRGSKR 498
           +S F+     GS H Q+GS+ G  H  S   A   R  P   G  P  S +
Sbjct: 2   NSYFEQSGFYGSHHHQSGSVAGHHHEQSAAAAAAYRSFPLSLGMSPYASSQ 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,272
Number of Sequences: 336
Number of extensions: 3382
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)