Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1144
(567 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 3.7
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 4.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.9
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 22 4.9
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 22 4.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 8.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.6
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 130 PDLSAASSGHFGLPRRTLVFK 68
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 116
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -3
Query: 310 LRIWVRTGATSPRTSLT*ISRSAESIRTP 224
++ W+ G T + +S+ +++RTP
Sbjct: 513 IKEWIERGTTKSMEAANIMSKLPKTVRTP 541
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 459 VWSMFVRNVRFSELVFYIMRPQKL 530
+W FV+N R L YI R + +
Sbjct: 88 LWDFFVKNARMILLEEYIPRVESV 111
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 459 VWSMFVRNVRFSELVFYIMRPQKL 530
+W FV+N R L YI R + +
Sbjct: 62 LWDFFVKNARMILLEEYIPRVESV 85
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 176 RIPWNSNAQAEKKTLPGPLG 117
+IPW+ N +A K G G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 505 NTNSLKRTLRTNIDQTRHRPHPLPV 431
N N+ + L NI+ P P+PV
Sbjct: 98 NNNNYNKKLYYNINYIEQIPVPVPV 122
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 505 NTNSLKRTLRTNIDQTRHRPHPLPV 431
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 505 NTNSLKRTLRTNIDQTRHRPHPLPV 431
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 505 NTNSLKRTLRTNIDQTRHRPHPLPV 431
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 505 NTNSLKRTLRTNIDQTRHRPHPLPV 431
N N+ + L NI+ P P+PV
Sbjct: 100 NNNNYNKKLYYNINYIEQIPIPVPV 124
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 505 NTNSLKRTLRTNIDQTRHRPHPLPV 431
N N+ + L NI+ P P+PV
Sbjct: 336 NNNNYNKKLYYNINYIEQIPVPVPV 360
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 85 DGVTQSGLKTPPRGPG 132
DG L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 448 PHPLPVQTRHAPVLRANPYSEV 383
P PLP A + + +PYS +
Sbjct: 652 PFPLPPNLASANISQLDPYSSL 673
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,646
Number of Sequences: 438
Number of extensions: 4247
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -