Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1142
(668 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16770.2 68418.m01964 myb family transcription factor (MYB9) ... 31 0.92
At5g16770.1 68418.m01963 myb family transcription factor (MYB9) ... 31 0.92
At1g76965.1 68414.m08961 glycine-rich protein 29 2.1
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 3.7
At5g42370.1 68418.m05159 expressed protein 29 3.7
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 29 3.7
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 29 3.7
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 3.7
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 4.9
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 28 6.5
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 28 6.5
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 28 6.5
At5g22390.1 68418.m02612 expressed protein 27 8.5
>At5g16770.2 68418.m01964 myb family transcription factor (MYB9)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 336
Score = 30.7 bits (66), Expect = 0.92
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = -1
Query: 500 Y*NTNSLKRTLRTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLE 321
Y NT+ K+ L+ ID HRP +T H VL A P L +L+
Sbjct: 107 YWNTHLRKKLLQMGIDPVTHRP-----RTDHLNVLAALPQLIAAANFNSLLNLNQNVQLD 161
Query: 320 ALHL--GDLLRIWVRTGATSPRTSSPEFSRS 234
A L LL ++ +T+ T++P FS S
Sbjct: 162 ATTLAKAQLLHTMIQVLSTNNNTTNPSFSSS 192
>At5g16770.1 68418.m01963 myb family transcription factor (MYB9)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 336
Score = 30.7 bits (66), Expect = 0.92
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = -1
Query: 500 Y*NTNSLKRTLRTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLE 321
Y NT+ K+ L+ ID HRP +T H VL A P L +L+
Sbjct: 107 YWNTHLRKKLLQMGIDPVTHRP-----RTDHLNVLAALPQLIAAANFNSLLNLNQNVQLD 161
Query: 320 ALHL--GDLLRIWVRTGATSPRTSSPEFSRS 234
A L LL ++ +T+ T++P FS S
Sbjct: 162 ATTLAKAQLLHTMIQVLSTNNNTTNPSFSSS 192
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 448 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 353
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 235 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 101
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 174 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 64
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 488 NSLKRTLRTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 363
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 488 NSLKRTLRTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 363
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 37 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 168
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 230 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 132
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 211 GGVRILSADLENSGEDVRGDVAPVRTH 291
GG+++ S + ++S +R DV+P RTH
Sbjct: 12 GGLKVESGEQKSSWPTMRFDVSPYRTH 38
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 457 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 338
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 457 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 338
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 109 ERSGKSFLFCLSVRVPWNPIEG 174
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,589,680
Number of Sequences: 28952
Number of extensions: 346168
Number of successful extensions: 1057
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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