Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1135
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    36   3e-04
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   0.38 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    24   0.88 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    24   0.88 

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = -1

Query: 433 QVADAVEYCHQHHVIHRDIKPENILVAFSGDLKLADFGWS 314
           QVA  +E+  +  V+HRD+   N+LV  +  +K++DFG S
Sbjct: 600 QVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLS 639


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 210 RYIPVTGWFHSAALSIPLL 154
           RY+ +  WF SA  S+P+L
Sbjct: 140 RYLILAAWFFSALYSLPIL 158


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 350 KSHQNIFWFYVTMYYMMLVTVFNSISYL 433
           +SH NI W+   + Y +  T  + ++YL
Sbjct: 193 ESHPNITWYQQCVTYNVFPTYAHELTYL 220


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 350 KSHQNIFWFYVTMYYMMLVTVFNSISYL 433
           +SH NI W+   + Y +  T  + ++YL
Sbjct: 193 ESHPNITWYQQCVTYNVFPTYAHELTYL 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,925
Number of Sequences: 336
Number of extensions: 2946
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)